| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1446 |
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| Symbol | |
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| ID | 7971274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1571557 |
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| End bp | 1572807 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792044 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943363 |
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| Protein GI | 239814453 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.82433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATG TCCAGTTCTC GCCCGACGAG CTCGCGACCC TGCGCGAGCA CGGCGTGGTC
CTGTTCGCGG ACCGCGTGAT CTTCGAGGCC CAGCCGCCCA TGCCGGCGCA GCGGATCGCC
GCCATCGAGG CGCTGTGCGC CGGCCCGCTG CCCGAGGCAC TGGCCGCGCT GTGGCGGCAG
ACGGCAGGCG GGCGGCTCGA CTACGACCTG TCGCTGCCGA TGGGCGGCAA CGTGGAATCC
ATCAGCTGGT CGGAGCTGTT CTGGGACGGC AGCGACGGCT ACCGCGACCT GCAGGGCTGG
ATCGAGCACG AACAGGAGCT GGCCGAAGAG GCCGCCAAGG AAGAAGGCCG CGCCTGGAGC
GGCAAGCTCA CGCACCTGCC CTTCGGCGGC TTCGAATACC TCGACCGCGT CTATGCGGTG
GTCGAGCCCG GCCCCGAGCA CGGCCGCATC GTCGCGTGGA AGCACGGGCT GCCGCCCGCC
TGGACGCATG CGCTGCACGA AGACAGCGTG AGCACCATCG CGCCCGACCT GCGCGGCGCC
TTCGCGGCCC TGCACCTGGA CGAGGATCCG CTGGCGCCCA CGGGCGACTA TTTCTCGGGC
CAGGACCTGC TGCAGTACCT CGACGACCGG CACCAGGACC ATGGCCTGGA TCTCGACCTG
ATGGACAAGC TGGTGGCCTT CTATTGCCGC GCCGTGGTCG ACTGGCGCAC GCCGCTGGCG
GACGGCACGC TGCGCCGGCT GCCGGCCATT GCGCGCGCCG CGCTGCACCA CGCCATCGGC
ACCGACGATG CGGATCTGGT GGCCGAACTC GCGGCCTCCG GCGTGAGCTT CGGTGGCCCG
CAGCAGGGCA GCGCGCTGGC CACCGACGTG GCCATTGGCC AGGGCGCCTT CGCCGCGGCC
ATGGCGCTGG TGCGCGCGGG TGCGCCGGTG GCGCGCGATG CGCTGGGCAA TGTCGACGGC
CAGATCTCGC CCGAGCTCAC GAGCGCGCTG CTCGCCAATG GGGCGGAGCC CAGCGTGGCG
GCCATCGTCA AATGCGCGGC CTGCGGTGCG CCCGCCAGCG CGCACCTGGT CGCCGATGCA
TGTGCAGAGG CCGGCATCGA CGTGCCGCCC GCCTTCGTGA TCGAACGCGA TGCGACGCTG
GCCGAACTCG AAGCCACGCT GCTCGAGGTC CGGGAAGGCA CGCACGGCCA CTACCTGGGT
GCCGAGGGCC TGGCCGAACG CATCGAGCAT CTGCAGACCT TCAGGCTCTG A
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| Protein sequence | MNDVQFSPDE LATLREHGVV LFADRVIFEA QPPMPAQRIA AIEALCAGPL PEALAALWRQ
TAGGRLDYDL SLPMGGNVES ISWSELFWDG SDGYRDLQGW IEHEQELAEE AAKEEGRAWS
GKLTHLPFGG FEYLDRVYAV VEPGPEHGRI VAWKHGLPPA WTHALHEDSV STIAPDLRGA
FAALHLDEDP LAPTGDYFSG QDLLQYLDDR HQDHGLDLDL MDKLVAFYCR AVVDWRTPLA
DGTLRRLPAI ARAALHHAIG TDDADLVAEL AASGVSFGGP QQGSALATDV AIGQGAFAAA
MALVRAGAPV ARDALGNVDG QISPELTSAL LANGAEPSVA AIVKCAACGA PASAHLVADA
CAEAGIDVPP AFVIERDATL AELEATLLEV REGTHGHYLG AEGLAERIEH LQTFRL
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