Gene Vapar_1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1339 
Symbol 
ID7973020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp1456010 
End bp1456600 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content67% 
IMG OID644791937 
ProductNADPH-dependent FMN reductase 
Protein accessionYP_002943256 
Protein GI239814346 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGACA GGATTCTCGT GTTCTATGGC TCGTACCGTT CCGACCGCAT GGGCATTCGC 
CTGGCCGACT ACCTGGTGGC GGGCCTCGAT GCGCGAGGCG CCGAGGCCGA GCTGATCGAC 
GCCAAGGCCG TCGGCCTGCC GATGCTCGAC CGCATGTACA AGGAATACCC CGAAGGCACC 
GCGCCCGCGG CGATGGAAGC GCTGGCGCAG AAGATACGCG GCGCGGATGC TTTCGTCTTC 
GTGACCGGCG AATACAACTG GGGCCCGCAG CCCGGCCTGA AGAACCTGAC CGACCACTTC 
CTCGAGGAAT GGTTCTGGCG CCCCGCCGCC ATCGCGAGCT ATTCGGCCGG CCGGTTCTCG 
GGCGTGCGCT CGGGCACCGT GTGGCATTCG GTTTTGTCGG AGATGGGCAT GGTCGTGGTG 
TCGAGCACAT TGGCCATCGG CCCGATCTCG CAGACGCTCG ATGCGAGCGG CAAGCCCACC 
GGCAGCGCGG GCGAATCGCT CGATCGCTCA TTCGGAAGGT TCGCGGACGA CCTGGCCTGG 
TGGACCGAGG CGGCGCGCGC GCAGCGGGCG CGCAAGGCGC CGCCTTATTG A
 
Protein sequence
MADRILVFYG SYRSDRMGIR LADYLVAGLD ARGAEAELID AKAVGLPMLD RMYKEYPEGT 
APAAMEALAQ KIRGADAFVF VTGEYNWGPQ PGLKNLTDHF LEEWFWRPAA IASYSAGRFS 
GVRSGTVWHS VLSEMGMVVV SSTLAIGPIS QTLDASGKPT GSAGESLDRS FGRFADDLAW 
WTEAARAQRA RKAPPY