Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1319 |
Symbol | |
ID | 7973000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1436371 |
End bp | 1437048 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644791917 |
Product | hypothetical protein |
Protein accession | YP_002943236 |
Protein GI | 239814326 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.195664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCCT CGCCCGGAGC CCGAAGCTGG ATCGCCGCCG GCGTACGCCA CGAACTGCTC ACCCGCGCCT TGCCGGCACT GCGCCACGAC ATGGCGGCCC CGGTGTCGGT GATCCGCATG GCGCTGCTCA TGCTCAAGCG CCAGATCGGC GCCCCGGTCA TCGATGCACC GGTCTGCGAG GAGCGCGTGG CGCTGATCGA CAACCAGGTG TCCGAACTCG TCGAGGGCAT CCGCTCGCTG CGCGACTGGG AACTGGCCAC GACGGATGAC GGCATCACGC GCAGCGCGCT GGTGGCGCAG TGCGTAGGCC TGATGCGCGC AGCCTTCGAC ATGCACGGCG TCGAGCTGGC TGTCGATGCC GCGCTCGAAC CGCGCGAGGG CGAAACGCGC TGGCCCCAGG GCGCCGCGCT GCGCTACCTG GTGCTTGGCG GCCTCGGATA CCTGCACGAC GGCGCATCCG AAGCCGGCGC GATCCGCATC GAGGCCGATG GCGGCAACGC GCTTCGCCTC AGTGCCTTGC CGCGCGAATC CGCCGGTGCC AGCCCGGTGC TCGACGCGCA CCGCGCCCCG CGTGCGCTGG CCATCGACGC GATTGCGCTC CAGAGCCTGG CGGAAGACCT GGGCTACACC GTGGCGCTCG AGCGCGACAG CGTGCGCTTT CCGCTCGCGC CGGGCTGA
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Protein sequence | MKASPGARSW IAAGVRHELL TRALPALRHD MAAPVSVIRM ALLMLKRQIG APVIDAPVCE ERVALIDNQV SELVEGIRSL RDWELATTDD GITRSALVAQ CVGLMRAAFD MHGVELAVDA ALEPREGETR WPQGAALRYL VLGGLGYLHD GASEAGAIRI EADGGNALRL SALPRESAGA SPVLDAHRAP RALAIDAIAL QSLAEDLGYT VALERDSVRF PLAPG
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