| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1309 |
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| Symbol | |
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| ID | 7972990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1425426 |
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| End bp | 1426430 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791907 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943226 |
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| Protein GI | 239814316 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTA CAGACCTTGT TCGCCCCGCG CGCCGGCAGG CCATGCGCAC CGCCATGGCC
CTGGGCCTTG CGGGTGCGCT CGCCGCGCCC GCCGCCTGGG CCCAGAAGTA CCCCGACAAG
CCGATCCGCC TCGTGGTCGG CTATTCGGCC GGCGGCGGCG TCGATGCGGT CGCGCGCCTG
CTCGGCACGC GCCTGTCGGC GGTGCTCGGC CAGCAGGTGA TGGTCGACAA CCGCACCGGC
GCCACCGGCA TGATCGCCGC CGAATACGTC GCCAAGTCGG CGCCGGACGG CTACACGCTG
ATGATGGGCG ACAGTGCGCT GCTGGCCGCC AAGCTGCTGC AGCCGAAGGC GCCGGTCGAT
CCGCTCACCA GCTTCAGGCC CGTCGCAGGC GCCTTCGTCT CGCCGCTGAT GATCGTCACA
GGCAACGACT TCCCGGCCAG GACGCCGGCC GAATTCGTGA AGGAGATCAA GGCCCGGCCG
GGACACTATT CCTACGCCAC CTCGGGCGTG GGCACGGTGC ACCACCTGGG CTTCGAGATG
CTCAAGCAGA CCAGCGGCAG CAAGGTGGTG CACGTGCCCT ACCGCGGCGC CGCGCAGATC
GTGCCCGACG TGGTCGGCGG CCAGGTGCCC ATCGGCGTGG TCAGCGCCAC GGCCGGCATG
GCGCAGGCCA AGGCCGGCAA GCTGCGCGCG ATCGCGCTGA TGAACACCGC GCGGCTCGAA
GGTGCGGAAA GCGTGCCTGC GCTGGCCGAT GCGCTGCCGG GCTTCGACGT GGCGCCGCGC
ATCTTCGTGC TCGCGCCCGC CGGCACGCCC GACGAGATCG TCGACAGGCT CTCGGCCGCG
GTGAAGACCG TGCTCGACAC GCCCGACGCC GGCGCCGCGG CAGCCGCGCA AGGCACGCTG
CGCGCCTACG CCACGCCGGC GCAGCTCGGC AAGGACATGG CGGAGGAGAC GAAGCGCTGG
CAGCGCATCA TTGCCGAGCA GAACATCGTG GCGGAGGGCA AGTAG
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| Protein sequence | MKATDLVRPA RRQAMRTAMA LGLAGALAAP AAWAQKYPDK PIRLVVGYSA GGGVDAVARL
LGTRLSAVLG QQVMVDNRTG ATGMIAAEYV AKSAPDGYTL MMGDSALLAA KLLQPKAPVD
PLTSFRPVAG AFVSPLMIVT GNDFPARTPA EFVKEIKARP GHYSYATSGV GTVHHLGFEM
LKQTSGSKVV HVPYRGAAQI VPDVVGGQVP IGVVSATAGM AQAKAGKLRA IALMNTARLE
GAESVPALAD ALPGFDVAPR IFVLAPAGTP DEIVDRLSAA VKTVLDTPDA GAAAAAQGTL
RAYATPAQLG KDMAEETKRW QRIIAEQNIV AEGK
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