Gene Vapar_1222 details

Gene Information

• Locus tag: Vapar_1222
• ID: 7973146
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 1336096
• End bp: 1336743
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644791819
• Product: flavin reductase domain protein FMN-binding
• Protein accession: YP_002943139
• Protein GI: 239814229
• COG category: [R] General function prediction only
• COG ID: [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.996876
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCATT CCACACCGCT TTCCGACTCC CCGGCCCAGC CTTCGTCTTT CCACCGCCGC 
CCGGTCCCCC TCGCCAAGGC CTACCGCCTG CTCAACCACG GCCCCACCGT CCTCGTGAGT 
GCCGCGCATG GCGGCCAGCG CAACATCATG GCTGCGGCGT GGGCAATGCC GCTGGATTTC 
GATCCGCCCA AGGTGGCGGT GGTGCTCGAC AAGAGCACCT GGACGCGCGT GCTGCTCGAA 
GGTGCGGGCA GCTTCGCGCT GCAGGTGCCT ACGCGGGCGC AGCTCGATCT CACCGATGCG 
CTGGGCAACA GCTCGGGCCG CGAGATCGTG GAGCGCGACG GGCACGACAA ATTTGCGGCC 
TATGGCTTGC GGACCTTTGC GGGCGTTGCA ACCGAGGCGC CGCTGCTGGA AGGCTGCGCG 
GCCTGGCTCG AATGCCGCCT GCTGCCCGAG CCGCCGATCC AGCAGCGCTA CGACCTATTC 
CTGGGCGAGG TGATCGCGGC GCAGGCCGAT GCGCGCGTGT TCGCCGACGG CCGATGGAAC 
TTCACCGGGC ATGACGAGCT GCGCACGCTG CATCACGTGG CGGGCGGGCA TTTCATCGTC 
GATGGCGAGG CCGTCGATGC GCGGCCGCTG GCGCCCGTGC GCCGCTAG 

 

Protein sequence

MAHSTPLSDS PAQPSSFHRR PVPLAKAYRL LNHGPTVLVS AAHGGQRNIM AAAWAMPLDF 
DPPKVAVVLD KSTWTRVLLE GAGSFALQVP TRAQLDLTDA LGNSSGREIV ERDGHDKFAA 
YGLRTFAGVA TEAPLLEGCA AWLECRLLPE PPIQQRYDLF LGEVIAAQAD ARVFADGRWN 
FTGHDELRTL HHVAGGHFIV DGEAVDARPL APVRR