| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1220 |
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| Symbol | |
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| ID | 7973144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1333354 |
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| End bp | 1334265 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791817 |
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| Product | transcriptional regulator, RpiR family |
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| Protein accession | YP_002943137 |
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| Protein GI | 239814227 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.930143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCTT CCCTGCTTCA GAAGATCGCG CAGGCCCGCA GCAGCGCGCC GGCCACGCGG
CGCGCGATTC TCGACCTGAT CCTCGAAGAC CCCGACCGCG CGCTCGAAGA GAGTTTCGAG
CAGCTGGCCG AGCGCTCGCG CAGCTCGGTG CCCACCATCA TGCGCACCTG CCGCGACCTG
GGCTTTGCGG GGCTGCGCGA ATTCAAGCTC GCGCTCGCGC AGGAGCTGGC GCTCGGCGGC
TCGCCGCTGC ACCGGCGCGT GAACATCGAG GACGCGGCCG ACGAGGTCGT CGGCAAGATC
GCGCGCAGCG CGGCGGCCTC GGTGTCCGGC GTGCGCGGGC AGCTCGACAT GCAGGTGCTC
GAAGGCGCGG TGGCCGCCAT CGCGGCCGCA CCGCACGTCG ACCTGTACGG CGCGGGCGCC
ACCTCGTGGT TCATGGCCAA CGACCTGCAG GCGCGGCTCT TCAGGCTCGG CCTCTCGGCC
AATGCCTGGG CCGACTACCA CCTGCAGCAG GTGGCGGGTG CGGCGCAGCG TCCGGGCGGC
GTGGTCATCG CCATCTCGCA CGTGGGCGGC ATGCCTTCGC TGCTCGATGC GGTGGACATC
GCGCGCGGGC AGGGTGCCAA GGTGGTCGCG CTCACGCGGC CCGGCACGGC CCTGGCGGCC
AAGGCCGACT TCCTGCTGGG CCTCTCGGTG CCCGACGACG CCGTGATGCA CGTGGGCATC
GATGCCTACC TGACGCACCT CACGGCGATC GAGATCCTCA CGGTGCTGGT GGCCCAGCGA
CGCGGCGAAC CCGCGGTGCA GCGCCTGCAG CGCGCGCGCG AAGCCTTCCA GCGCCACGGC
ATCGACGCCA CCACGCATCC GCTGCAAAGC TGGGATGGCG GCGGCATCAA CACGGGAGGG
CCCGCATCGT GA
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| Protein sequence | MTPSLLQKIA QARSSAPATR RAILDLILED PDRALEESFE QLAERSRSSV PTIMRTCRDL
GFAGLREFKL ALAQELALGG SPLHRRVNIE DAADEVVGKI ARSAAASVSG VRGQLDMQVL
EGAVAAIAAA PHVDLYGAGA TSWFMANDLQ ARLFRLGLSA NAWADYHLQQ VAGAAQRPGG
VVIAISHVGG MPSLLDAVDI ARGQGAKVVA LTRPGTALAA KADFLLGLSV PDDAVMHVGI
DAYLTHLTAI EILTVLVAQR RGEPAVQRLQ RAREAFQRHG IDATTHPLQS WDGGGINTGG
PAS
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