| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1213 |
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| Symbol | |
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| ID | 7973383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1325904 |
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| End bp | 1326293 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791810 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_002943130 |
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| Protein GI | 239814220 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTCG AATACCTCGG CGCCCCGCCC ATCGCCTCGG ACCGCCAGGC CCGCCCCTTC
TCCCCGGCCG TGCGCGCCGG CGATTTCATC TACGTGTCGG GCCAGGTGCC GGCCAATGCC
GAGGGCGAGA TCGTGGGGGG CGGCATCGAG GCGCAGACGC GCCAGGTGAT GGAAAACCTG
AAGAAGGTGC TGGCGCTGGC CGGCGCCACG CTCGACGACG TCTGCAAGAG CACCGTCTGG
CTGCAGGACG CGCGCGACTT TGGTGCCTTC AACCGCATCT ACATGAGCTA CTTCGGTGAC
AACAAGCCGG CGCGCTCGAC CACCGAGGCG CGGCTGATGG TCGACGCCAA GGTCGAGATC
GACGTGGTGG CCTACAAGCC CAAGGCCTGA
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| Protein sequence | MPLEYLGAPP IASDRQARPF SPAVRAGDFI YVSGQVPANA EGEIVGGGIE AQTRQVMENL
KKVLALAGAT LDDVCKSTVW LQDARDFGAF NRIYMSYFGD NKPARSTTEA RLMVDAKVEI
DVVAYKPKA
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