Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1209 |
Symbol | |
ID | 7973379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1322183 |
End bp | 1323151 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644791806 |
Product | hypothetical protein |
Protein accession | YP_002943126 |
Protein GI | 239814216 |
COG category | [S] Function unknown |
COG ID | [COG4255] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAAC CTTCCTCCCG TCACTTGTTG ATCCCCTTTG CCGGCCGCGG TTCCCCGGTG TGCCGCGCGG CACTGCCCGC GCTCCGGCTT CCCAATCTCG AAGCGCTGCT CTCGCGGCTC TCGCTCGCGG AGGCCGACAC GCAGGACGAA AGCACGCGCT CGCCGCCCCA TGAACGCGCG CTGGCCCGGG CGCTGGGCAT TTCCGCAGCC GACGGCTGCA TTCCCTGGGC CGCGCTGGAA GCCCGGCAGG CCGGCATTGC CGAACCCGGC GACCGCGAAG GCTGGGGCCT GGTCTCGCTG TGCAACTGGC AGGTGGGCAT CGACGACGTG GTGCTGGGCG ACCCGGCCGC GATCGAGATC GATGCTGCCG AATCGGCCGC GCTGCTGGCC GCCGCCCATC CCTTCTTCGA GGAAGACGGC ATCGCGCTGC ACCCCTCCCC CACACCCGGC CGCTGGCTCG CGCGCGCGCA CATCTTCGCG GGACTGGCCA CGGCCTCCAT CGACCGCGCG GTGGGCCACC CGATCTCGCA GTGGTCGCCG CTGGCCGAAG CCGCACGGCC GCTGCGCCGC CTCCAGAACG AAATGCAGAT GCTGCTCTAC ACCCAGCGCG TGAACGACGA CCGCGCCGCG CGCGGCGTGC CGCCGATCAA TTCCTTCTGG CTCAGCGGCA CCGGCGCCCT GGAGCCCGGC GTTCCCCCGG CCGGCACCGC CGCGCCCACG GTGAGCGACA CGCTGCGCGT GGCCGCCCTG CGCGACGACG GCCTGGGCTG GGCCGAAGCC TGGCAGGCGC TGGACGCAGG CCCCGTCGCC GGCCTGCTGG CCGCCTACAC CGCCGGTGCC GACGTCACGC TCACGCTGTG CGGCGACCGC ACCGCGCAGC GCCATGCGGT GCAGCCGCGC GGGCTGGTGG GCTGGGCCCG AAGCCTGTTC GACCGGCCGC GCGCCGCCAG CGTGCTGGAG GCCCTGTGA
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Protein sequence | MAEPSSRHLL IPFAGRGSPV CRAALPALRL PNLEALLSRL SLAEADTQDE STRSPPHERA LARALGISAA DGCIPWAALE ARQAGIAEPG DREGWGLVSL CNWQVGIDDV VLGDPAAIEI DAAESAALLA AAHPFFEEDG IALHPSPTPG RWLARAHIFA GLATASIDRA VGHPISQWSP LAEAARPLRR LQNEMQMLLY TQRVNDDRAA RGVPPINSFW LSGTGALEPG VPPAGTAAPT VSDTLRVAAL RDDGLGWAEA WQALDAGPVA GLLAAYTAGA DVTLTLCGDR TAQRHAVQPR GLVGWARSLF DRPRAASVLE AL
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