Gene Vapar_1198 details

Gene Information

• Locus tag: Vapar_1198
• ID: 7973367
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: -
• Start bp: 1312245
• End bp: 1312865
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 644791794
• Product: lipoprotein
• Protein accession: YP_002943115
• Protein GI: 239814205

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.645433
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGGCCA CGGCGCGGCA TATCTATAGC GGCAGCGCCG CGACGCCCCA GCCCACTTTC 
AACCCGAATT ACCGCTATTT GCGGGTCGCC GTCGGCAAGC AGACGGTCTT CATGGTGCTC 
GGCTACATCG ACCAGCGCCC CGAAGGCGCC GTCGAGGTCT GGTACAGCGG CAACGGCGAG 
GTCGTGAGGC TGCTCGACGG ACGCCTTGTG GGAACCACCG GCCTTCGCAC CGACTGGCGC 
GAGGTGCGCT TTTCCAGCCT GCCCGCGTGG GCCGGCGATG CGAATGGCGC GGCGCCAAAG 
ACCTACCAGC GCGAGCGCGA CATGATGCCG GGCTACCGGT TCGGCATTCG CGACGAGATC 
GTGCGCACGC CCATTGCTGC ACCGCAACAG ACCGCGCTGG CCGGCACGGC TGGCGCGTCG 
CTGCGCTGGT ACGAGGAGCG CAGCGTTTCG CATCCGGCGA GCGCCTCGCT GCCTCCGGCG 
CGCTTTGGCG TTTCGCAAGC GGGCGGCACG CCTCGGGTCG TCTATTCCGA GCAATGTATT 
TCCAATGACC TGTGTATGAG CTTCGAGCAG TGGACGCCTT CCCCCCCAGC ACCCGTCGCA 
GCGGCGAGCG CTGGTACATG A 

 

Protein sequence

MLATARHIYS GSAATPQPTF NPNYRYLRVA VGKQTVFMVL GYIDQRPEGA VEVWYSGNGE 
VVRLLDGRLV GTTGLRTDWR EVRFSSLPAW AGDANGAAPK TYQRERDMMP GYRFGIRDEI 
VRTPIAAPQQ TALAGTAGAS LRWYEERSVS HPASASLPPA RFGVSQAGGT PRVVYSEQCI 
SNDLCMSFEQ WTPSPPAPVA AASAGT