| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1193 |
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| Symbol | |
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| ID | 7973362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1304325 |
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| End bp | 1305488 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644791789 |
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| Product | putative polysaccharide pyruvyl transferase |
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| Protein accession | YP_002943110 |
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| Protein GI | 239814200 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2327] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0927448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGATT CACAGATGAA AAAGATCCTT ATCTGCGCCG TGCCTTTCAG CGACAACCTG
GGCGACGGGG TCATTGCGGC ATCCCTGGCC CATATTGCGG GCCTGAAATA TCCGCAGGCC
CGGGTCGAAT TCCTGGACAT TGCCGGCCGG CTCGGCTTCG AGGAAGAAAA CCTGCGCGGC
GGCGGCGCAT TCCGGCTCTT TGCGAAGCTG CCTTCGTTCA TCAGGTCGGT GATCGTGTTC
CTGTATTGCC TCAAGGGCTA TTTTCTCGGC TGGCGGAAGA ACTGGAAGGC CGCTGTCGAC
GATGCGGATC TGGTCGTCAT TGGCGGCGGG CAGCTGTTTT GCGACGTGGC GCTCAATTTT
CCGGCGAAGC TGTTTCTCCT GAGCCGGCTG CTGCGTGGAA AGAAGGTGGT GATCCTGTCG
GTGGGCGTGA CGGCGAAATG GTCTTTTCTC GGGCGCTTTC TCGTCGGGCG ATTCCTGAAA
AATGCGAGGC CCGCCTTCTA CGCCACCCGC GACCAGGAAT CGGCCAGCAA CCTGCACAAT
TACTTCCGAA TCCCGAGAAG CGATATACAG GTGGTGCCCG ATCCGGCGCT CATCTGCGCC
GACGCCTTCT CGGACGAGCT TTCGCCGGAA AAGAATTGGG ACATCGGAAT TTGCGTCAGC
AGCCTCGATG CGCTGGTGAT GAATTCCGAA TACGAAGGCT CCAATTCAAC GCCGTCGGCC
AAATTCTTTG CCACGCTGGC CGAATCATTG CGGGCCGAGG GAAAGCGGGT GCTTTATTTC
ACGAACGGCG CCTCCGAAGA CAACAAGGTC CTGGAAGAAA TTTCCTCGGC CTCCGATGCG
CCGAAATCGA TTTTTCTCGT TCCCCGGCAC CCGGATGAAC TCGTTGCCTT GATCAGCGCC
TGCTCGTGCA TCGTGGCGCA CCGGCTGCAC GCGAATATCG TGGCCTACGG TTTGAACATT
CCGTCCATAG GAATGAATTG GGACAAGAAG GTGGAGTCGT TTTTCGAACT GACCGGCAGA
AAGCGCTACC TCTTCGACTT GTCGCCCCGC GTCGAAAAGC TGGGTACCTC GGTGCTGGGC
CTGCTCGATG ACCGGCACCC GGACCGCAAA GCGCTCGACG CATTGAGAAG CCAGGTGGTG
GCCGGTATCC ATGCATTGAT CTGA
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| Protein sequence | MLDSQMKKIL ICAVPFSDNL GDGVIAASLA HIAGLKYPQA RVEFLDIAGR LGFEEENLRG
GGAFRLFAKL PSFIRSVIVF LYCLKGYFLG WRKNWKAAVD DADLVVIGGG QLFCDVALNF
PAKLFLLSRL LRGKKVVILS VGVTAKWSFL GRFLVGRFLK NARPAFYATR DQESASNLHN
YFRIPRSDIQ VVPDPALICA DAFSDELSPE KNWDIGICVS SLDALVMNSE YEGSNSTPSA
KFFATLAESL RAEGKRVLYF TNGASEDNKV LEEISSASDA PKSIFLVPRH PDELVALISA
CSCIVAHRLH ANIVAYGLNI PSIGMNWDKK VESFFELTGR KRYLFDLSPR VEKLGTSVLG
LLDDRHPDRK ALDALRSQVV AGIHALI
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