Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1188 |
Symbol | |
ID | 7973357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1298316 |
End bp | 1299008 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644791784 |
Product | phosphoesterase PA-phosphatase related |
Protein accession | YP_002943105 |
Protein GI | 239814195 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATT TCTGGTTAAT TGCCACCGGC TTCGGTGACA GCGGCTTCCT GTTGCCCACC GCATTGGGAA TTGCTATTTG GCTCGCAATC GACCGCGGCA CGCGCCCGGC GGCGGTGCGG TGGACGCTGC TATTCGGCGG TTGCGGTTTC ATCGTGATGC TGTCCAAGCT TCTGTTCATG GGCTGGGGCA TTGGCAGCGC CCATTTCGAT TTCATCGGCT TCAGCGGACA TACCGCGCTG GCAACCAGCG TCTGGCCGGT CGTTTTCTGG CTGGCGGCGC GGCGCCGCGC ACCAAAGGTG CGCATGGCGG CTGCGGTATC GGGATGGGTA TGGGGCGTCT TCATCGGCGT GTCGCGCCTG GCCCTCGAAG TTCACTCCAC CGCAGAGGTC GTCACGGGTG CGATGCTTGG AACAGTTGTA AGCGCAAGCT TTTTGCTGTT GCATTGGCAC CAGTCCATGT TGGTCAGAAC ACCCCGCTGG CTCACCTTGG CGATGGCGCT GCCGCTCCTC TTTTTCATAG TGGGGCGGCC TGCACCCACA CAGGACGCGC TGGAAACGCT TGCCGCGTGG ATGGCGGGCA TCGAGCGCCC GTTCACCCGT GCCGATCTCC TGCAGAACCG CAGGGCCGTG CGTCAGCCTG CCAACAGCAC ACAGTTCCTT ACAAAAGAGC AAAGCTTTTC ACCAAGCGAT TGA
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Protein sequence | MNNFWLIATG FGDSGFLLPT ALGIAIWLAI DRGTRPAAVR WTLLFGGCGF IVMLSKLLFM GWGIGSAHFD FIGFSGHTAL ATSVWPVVFW LAARRRAPKV RMAAAVSGWV WGVFIGVSRL ALEVHSTAEV VTGAMLGTVV SASFLLLHWH QSMLVRTPRW LTLAMALPLL FFIVGRPAPT QDALETLAAW MAGIERPFTR ADLLQNRRAV RQPANSTQFL TKEQSFSPSD
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