| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1186 |
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| Symbol | |
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| ID | 7973355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1296700 |
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| End bp | 1297749 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791782 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_002943103 |
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| Protein GI | 239814193 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGCC ACGCTCCCCT TGCCATCACG CTGGGCGATC CCGCGGGCAT CGGCCCGGAA
ATCATCGCCA AGGCCTTCCG CCAGGCGCCC GACGCCACGC GCGGCGCGTT CGTGGCCGGC
GACGTGGCCG CGATGCGCCG GGCATCGCAG GCGCTGGCCT CGCCGGGGCA ACCCGCCTGG
CCGGTGGCGC GGATCGAGCG CATTGCCGAA GCGGCCGCGG TGCCGCCGGG CTGCATCCCG
GTGCTGCAGG TGGTGGCCGC GCCGGCGGAA GACATCGTGC CGGGCCGCAT CAGCGCCGAA
GCCGGCCGCG TGGCCGGCCA CTGCGTGGTC TGGGCCGCGC GCGCCGCCTT GCGTGGCGAG
ATCGCCGCCA TCGTCACGGC GCCGCTGCAC AAGGAAGCGC TGGCCGCCGC CGGATTTCCC
TATCCCGGCC ATACCGAACT GCTGCAGGCC GAGGCCGCCG CGCATGCGGG CGTCGCGGTG
GACGGCATGC CGGTGCGCAT GATGCTGGCC AACGACGAAC TGCGCACCGT GCTGGTGAGC
ATTCACATGT CGCTGCGCGA CGCCATCACC GCCGTGAGCT TCGGCAGCGT GCTGGAGACG
CTGCGCATCA CCCACCGCGC CTTGCAGCGC ATGCTCGGGC GGGCGCCGCG CATCGGCGTG
GCCGGCCTCA ATCCGCATGC GGGCGAGGGC GGACTGTTCG GCTCCGAAGA GCGCGACATC
ATTGCGCCGG CAATTGCGGC CGCCCTTGCC GAAGGCATCG ATGCCCACGG GCCTTATGCG
CCCGACACCG TCTTCATGCG CGCGCGTGCC AGGCCCGAGG TGCCGGGGAG CGGCGAGTTC
GACGTGGTGA TTGCCATGTA CCACGACCAG GGCCTGATCC CGGTCAAGTA CCTTGGCGTG
GAGAAGGGCG TGAACGTGAC GCTGGGCCTG CCGCTGGTGC GCACCAGCCC CGACCACGGC
ACCGCATTCG ATATTGCAGG CACCGGCCGG GCCGATGCGT CGAGCCTCGT CGAGGCGCTG
CGCATGGCCA GAACCTTGGC GGGCGCCTGA
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| Protein sequence | MNGHAPLAIT LGDPAGIGPE IIAKAFRQAP DATRGAFVAG DVAAMRRASQ ALASPGQPAW
PVARIERIAE AAAVPPGCIP VLQVVAAPAE DIVPGRISAE AGRVAGHCVV WAARAALRGE
IAAIVTAPLH KEALAAAGFP YPGHTELLQA EAAAHAGVAV DGMPVRMMLA NDELRTVLVS
IHMSLRDAIT AVSFGSVLET LRITHRALQR MLGRAPRIGV AGLNPHAGEG GLFGSEERDI
IAPAIAAALA EGIDAHGPYA PDTVFMRARA RPEVPGSGEF DVVIAMYHDQ GLIPVKYLGV
EKGVNVTLGL PLVRTSPDHG TAFDIAGTGR ADASSLVEAL RMARTLAGA
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