| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1184 |
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| Symbol | |
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| ID | 7973353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1294524 |
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| End bp | 1295867 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791780 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002943101 |
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| Protein GI | 239814191 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCTC ACGCAATCTC CCCGGACGGC ACGCAGCCGG TGCCGGCGCG CACGCTCGAC
GCGCGCGACT ACAAGACCCT GGCCCTGTCC GCGCTCGGCG GCACGCTGGA GTTCTACGAC
TTCGTCATCT ACGTGTTCTT CGCCACCGTG CTGGGTGCGC TTTTCTTCCC CGCCGACATG
CCCGACTGGC TGCGGCAGCT CCAGACTTTC GGCATCTTCG CGGCCGGCTA CCTGGCCCGC
CCGGTGGGCG GCATCGTCAT TGCGCATTTC GGCGACCTGC TCGGCCGCAA GCGCATGTTC
ACGCTGTCGA TCTTCCTGAT GGCGGCGCCC ACGCTGGTCA TCGGCCTGTT GCCCACCTAC
GCGAGCATCG GCATCGCCGC ACCCTTGCTG CTGCTCGCGA TGCGCGTGCT GCAGGGCGCG
GCCATCGGCG GCGAAATGCC CGGTGCCTGG GTGTTCATCG GCGAGCACGT GCCGGCGCAT
CGCTACGGGT TCGGCATCGG CGCGCTGACT TCGGGCATTA CGGGCGGCAT CCTGCTGGGC
TCGCTGGTGG CCGTGGCCAT CAACCGCCAC TATTCGCCGG CGGAGGTGAG CGGCTTTGCC
TGGCGCATTC CCTTCGTGCT GGGCGGGGTG TTCGGCCTCG TCTCGGTGTA CCTGCGCCGC
TTCCTGCACG AGACGCCGGT CTTCAAGGAG CTGGCAGGCC GCAAGACGGT GGCGCGCGAG
CTGCCGCTGC GCACCGTGCT GCGCGAGCAC CGCGCGGCCA GCGTCTACGT GGCGCTCCTG
ACCTGGGTGC TGTCGGCCGC CATTGTGGTG GTGGTGCTGT ACACGCCCAC TTACCTGCAG
AAGGTGCACC ACATTCCGGC TGCGCTGGCG CTGGAAGCCA ACGCCCTGGC CACGCTGACC
CTGACCATCG GCTGCGTGCT GGCCGGCTGG GCCAGCGACC GCATCGGCAC GCGCGCCGTG
ATGCTCGTCG GATGGGGCGG ATTGTTCGCA ACGGCCTATC TTTTCTACAC GGGACTGCCC
GGCACGCCGG CCACGCTGTT CTGGCACTAC AGCCTGGTGG GATTGTTCGT GGGCACCATC
GCCACGGTGC CGATCGCGGG CGTGCGTGCG TTTCCGGCGC CGGTGCGCTT CACGGGGCTT
TCGTTTGCCT ACAACATGTC GTATGCGGTG TTCGGCGGCC TCACGCCGGT GATCCTCACG
CTCTGGCTGC AGCACGACAC CATGGCACCG GCGCACTACG TCGCCGTGCT GGCCGGGCTG
GGCTTCGTGC TGGCCCTGTG GCCATTGGCG GCGCGCGGCC ATGCGATGCG CGACGGCATC
GGGAGCGCGA CAATGGCGCG ATGA
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| Protein sequence | MTSHAISPDG TQPVPARTLD ARDYKTLALS ALGGTLEFYD FVIYVFFATV LGALFFPADM
PDWLRQLQTF GIFAAGYLAR PVGGIVIAHF GDLLGRKRMF TLSIFLMAAP TLVIGLLPTY
ASIGIAAPLL LLAMRVLQGA AIGGEMPGAW VFIGEHVPAH RYGFGIGALT SGITGGILLG
SLVAVAINRH YSPAEVSGFA WRIPFVLGGV FGLVSVYLRR FLHETPVFKE LAGRKTVARE
LPLRTVLREH RAASVYVALL TWVLSAAIVV VVLYTPTYLQ KVHHIPAALA LEANALATLT
LTIGCVLAGW ASDRIGTRAV MLVGWGGLFA TAYLFYTGLP GTPATLFWHY SLVGLFVGTI
ATVPIAGVRA FPAPVRFTGL SFAYNMSYAV FGGLTPVILT LWLQHDTMAP AHYVAVLAGL
GFVLALWPLA ARGHAMRDGI GSATMAR
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