| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1178 |
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| Symbol | |
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| ID | 7973347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1290648 |
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| End bp | 1291037 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644791774 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_002943095 |
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| Protein GI | 239814185 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3671] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAACG ACATCGTGAA CGTGGAACCC GACGACTCGC TCAAGACCTG GGGCTGGATC
AGCTACATCC TGCACCTGAT CGTGGCCATT GGCGCCGTCC TGCCGGGGGC GCAGGCCTCG
GTGGCGCTGC TGCTGCTGGC GCTGCTGATC GACTTCATCA AGCGCGACGA CGCGGCAGGC
ACCTGGCAGG CCACGCATTT CAGCTGGCGC ATCCGCTCGG TGCTGTGGGC GGGCCTGCTG
TACATCCTGA CCTCGTGGCT CTGGCTGCTC TTTCTCGTGC CGGGCTGGAT CGCCTGGAGC
CTCATTTCGC TGTGGTTTCT CTACCGGATC GTGAAGGGCA TGATCCGCAT GAACGGCAGC
CGTCCCATGG AACCCAAAGA TGTCATCTGA
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| Protein sequence | MANDIVNVEP DDSLKTWGWI SYILHLIVAI GAVLPGAQAS VALLLLALLI DFIKRDDAAG
TWQATHFSWR IRSVLWAGLL YILTSWLWLL FLVPGWIAWS LISLWFLYRI VKGMIRMNGS
RPMEPKDVI
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