| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1169 |
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| Symbol | |
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| ID | 7973338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1283092 |
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| End bp | 1283748 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791765 |
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| Product | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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| Protein accession | YP_002943086 |
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| Protein GI | 239814176 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0118] Glutamine amidotransferase |
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| TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCTG TAGCAAATAC CGTCGCCGTG GTCGACTACG GCATGGGCAA CCTGCGCTCC
GTCTCGCAGG CCGTGCAGCA TGCGGCCGAC CAGGTGGGCG TGCAGGTCTT CGTCACCTCC
GACCCCGAGG TGGTGCGCAA GGCCACGCGC GTGGTGCTGC CGGGGCAGGG CGCGATGCCC
GACTGCATGC GCGAACTGCG CGACTCCGGC CTGCAGGAGT CGGTGCTCGA GGCCGCGGCG
AGCAAGCCGC TCTTCGGCGT GTGCGTGGGC ATGCAGATGC TGCTGTCGCG CAGCGACGAG
GGCCCGACCG ACGGGCTCGG GCTGATTCCG GGCGAGGTCG TCAAGTTCGA CCTGGCGGGC
CGGCTGCAGC CCGACGGCAG CCGCTTCAAG GTGCCGCAGA TGGGCTGGAA CCAGGTGCGC
CAGGCCCAGC CGCACCCCGT GTGGGCGGGT GTGCCGGACA TGAGCTACTT CTATTTCGTG
CACAGCTTCT ATGCCCGGCC GGCCGACGCC CGGCACAGCG TGGGCGAGGC CGACTACGGG
GCGTGCTTTA CCGCCGCCGT CGCACGCGAT AACATTTTTG CCACCCAGTT CCACCCGGAG
AAGAGTGCGG ACCATGGGTT GCAGCTCTAC CGAAATTTCC TCCACTGGAA TCCCTGA
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| Protein sequence | MKSVANTVAV VDYGMGNLRS VSQAVQHAAD QVGVQVFVTS DPEVVRKATR VVLPGQGAMP
DCMRELRDSG LQESVLEAAA SKPLFGVCVG MQMLLSRSDE GPTDGLGLIP GEVVKFDLAG
RLQPDGSRFK VPQMGWNQVR QAQPHPVWAG VPDMSYFYFV HSFYARPADA RHSVGEADYG
ACFTAAVARD NIFATQFHPE KSADHGLQLY RNFLHWNP
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