| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1161 |
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| Symbol | |
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| ID | 7973330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1276650 |
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| End bp | 1277414 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644791757 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_002943078 |
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| Protein GI | 239814168 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1511] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.843909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCCG TCACGGGGTG GCGTGCGCTG CTTTACAAGG AAACGCTGCG CTTCTGGAAG
GTTGGCTTCC AGACCGTCGG CGCGCCGGTG CTCACCGCGC TGCTCTACCT GATGGTGTTC
GGCCACGTGC TCGAAGACCA CGTGAAGGTC TACGGCTCGG TCGGCTACAC CGCCTTCCTG
GTGCCGGGCC TCGTGATGAT GAGCGTGCTG CAGAACGCCT TCGCCAACAG CTCGTCGTCG
ATCATCCAGA GCAAGATCAT GGGCAACCTG GTGTTCGTGC TGCTCACGCC GCTGTCGCAC
TGGGGCTGGT TCTTCGCCTA CGTGGGCTCG TCGGTGATCC GCGGGTTGGC CGTGGGGCTC
GGCGTGTTCC TGGTCACCAT GTTCTTCGCG ATGCCGAGCT TCGTTGCGCC GCTCTGGATT
CTCGTGTTTG CGCTGCTGGG CTCCGCCATG CTCGGCACCC TGGGGCTCAT TGCCGGGCTC
TGGGCCGAGA AGTTCGACCA GATGGCGGTG TTCCAGAACT TCCTGATCAT GCCCATGACC
TTTCTCTCGG GCGTCTTCTA TTCGATCGGT TCGCTGCCGC CGTTCTGGCA GGGCGTGAGC
CACCTGAACC CGTTCTTCTA CATGATCGAC GGCTTCCGCT ACGGCTTCTT CGGCGTGAGC
GACGCCTCGC CCTGGCTCAG CCTGGGCATC GTCGGCGCCG CCTGGCTGGT GGTGAGCGCC
ATCGCCGTCC ACCTGCTGCG CATCGGCTAC AAAATCAGAG GCTGA
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| Protein sequence | MMAVTGWRAL LYKETLRFWK VGFQTVGAPV LTALLYLMVF GHVLEDHVKV YGSVGYTAFL
VPGLVMMSVL QNAFANSSSS IIQSKIMGNL VFVLLTPLSH WGWFFAYVGS SVIRGLAVGL
GVFLVTMFFA MPSFVAPLWI LVFALLGSAM LGTLGLIAGL WAEKFDQMAV FQNFLIMPMT
FLSGVFYSIG SLPPFWQGVS HLNPFFYMID GFRYGFFGVS DASPWLSLGI VGAAWLVVSA
IAVHLLRIGY KIRG
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