Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1159 |
Symbol | |
ID | 7973328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1275260 |
End bp | 1275532 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644791755 |
Product | sulfate transporter/antisigma-factor antagonist STAS |
Protein accession | YP_002943076 |
Protein GI | 239814166 |
COG category | [R] General function prediction only |
COG ID | [COG3113] Predicted NTP binding protein (contains STAS domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.306172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGTCC TGCCCTCCAA GCTCACCCAC GACGAAGCCC CGGCCTGCAT GCGCATGCTG CAGCAGGGGC TGGCGGGACA GGCCGACACA TCCACGGTGG TGGACGCCAG CGCGCTCGCG CATTTCGATT CCTCGGCCTT GGCGGTGCTC CTGGAGTGCC GCCGCGAATC GAGCGCGCTC GGCCGGGGCT TCGCGGTCAA GGGGCTTTCG CCGCGGCTGC GCGAACTGGC TGCGCTCTAC GGCATTGCGG GGCTGCTGCC GGCGGCGCCC TGA
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Protein sequence | MLVLPSKLTH DEAPACMRML QQGLAGQADT STVVDASALA HFDSSALAVL LECRRESSAL GRGFAVKGLS PRLRELAALY GIAGLLPAAP
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