| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1121 |
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| Symbol | |
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| ID | 7969643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1230118 |
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| End bp | 1231725 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791717 |
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| Product | phospholipase D/Transphosphatidylase |
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| Protein accession | YP_002943038 |
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| Protein GI | 239814128 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCACA AGTTCCTCGC CTCTTTGTTC CCCGCGCTGC GCGGCCTGGC GCTTTGGCTG
GTGGCCGCTG GCATCGCCGG GGTGCTCGCA GGCTGCGCCG GCCTGCCTCC GCGCACGCCC
GAGCCGCCAA CGCTCTCGAT CGCCGCCTCG CCCTCCACCG CGCTCGGCCG CGCCGCGGCC
AGCCTGGACA CCGCCGCGCA CGATGGGCTG TCGAGCATCC GGCCGCTGGT GGAGGCTTCC
TTTGCGCTCG ATGCACGCTT CGAGCTGATG CGGCGCGCGC AGGCCTCGCT GGACGTGCAG
ACCTACCAGC TCGGCAACGA CAAGACCGGC CGCCTGCTGC TGCGCGAACT GCGAAATGCT
GCGCGCCGCG GCGTGCGGGT GCGCCTGCTG CTCGACGACT TCTACACGAC CGGCATGGAC
CGCCTGCTGC TCGGCCTGGC CGCGGAGCCC AATGCCGAGG TCCGGCTGTT CAACCCCTTC
GTCAACGCCC GCGACCACTC GGCCACGCGC TGGCTCGAGT TCTTCGGCGA TTTCCGCCGG
CTCAACCACC GCATGCACAA CAAGCTCTTC GTGGCCGATG GCGCCATGGC CATCGCGGGC
GGGCGCAACC TGGCCGACGA ATACTTCCTG CGCAGCGAGG ATGCCAACTT CATCGACTTC
GAGCTCCTCA TGGCGGGCCC CGTGGTTCCG GAAGCCGCCC GCATCTTCGA CACCTACTGG
AACAGCGAGG TGGTCTACCC GCTCCAGCGG GTTGCCGGCG CCAGCGGCAC GCCGGAGGCC
CTGAAGTCGG AATTCGAAGC CGCCACCTCG GCGGTCCACG CCCCTGCGCC GGCCGCGCTT
CAGGGCACCG ACGTGATGGG CGACCCGCCG CTCGGCGTCC AGCTGGCCGA CATCGGCCGC
ATGAAGTGGA TGCGCGCCGA CGCCCATGCC GCGGCCGACA GCCCCAACAA GGCGCTGGGC
ATCCTCGCAT CGCCCGCCGA ATCGCTCGCT GCGCGCTTCC ATGAGATGAC CGCCACGGCG
CGCTCGGACG TGGTGGTGAT CTCGCCCTAC TTCATTCCCG GCGACGAAGG CATGGCCCGC
ATCCGCGAGG GCCGGGCGCG CGGCGTGCGC ATCAGCGTCA TCACCAATTC GCTGGCCGAC
AGCGACGAGC CGCTGGTCAA CATCAACTAC AACCGCTACC GCGTCGACAT GCTGAAGCTG
GGCGTGAACC TGTACGAGGT CAGCACCCAG CAGCTCAAGC GCAACCGCCA GCTGCGCAGC
CTGCTCAAGA AGGCGCGCGG CCGCCTGCAT GCCAAGCTCG CGCTGGTCGA CCGCGAGTGG
GTGCTGCTCG GCTCGATGAA CCTCGACCCG CGCTCGGCGC GGCTGAACAC CGAATTCGGC
GTTCGCGTGC GGAGTTTCGA GCTGACCCAG GCACTTCTGT ATGCCTACCA GCTGGACGAC
ATCGAGGGCG TCTACCGCGT CGTGCTGATG CCCGACGGCG AGAACGTGCA ATGGATAGGC
ACCGGCGACG TGGACAACGA GGTGCTGGAC AGCGAGCCCG ATTCGAGCCT GCTCACGCGG
CTGCAGCTGC TGCTGTTCTC CTGGTTCGTG CCGACCGACC AGTTGTAG
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| Protein sequence | MLHKFLASLF PALRGLALWL VAAGIAGVLA GCAGLPPRTP EPPTLSIAAS PSTALGRAAA
SLDTAAHDGL SSIRPLVEAS FALDARFELM RRAQASLDVQ TYQLGNDKTG RLLLRELRNA
ARRGVRVRLL LDDFYTTGMD RLLLGLAAEP NAEVRLFNPF VNARDHSATR WLEFFGDFRR
LNHRMHNKLF VADGAMAIAG GRNLADEYFL RSEDANFIDF ELLMAGPVVP EAARIFDTYW
NSEVVYPLQR VAGASGTPEA LKSEFEAATS AVHAPAPAAL QGTDVMGDPP LGVQLADIGR
MKWMRADAHA AADSPNKALG ILASPAESLA ARFHEMTATA RSDVVVISPY FIPGDEGMAR
IREGRARGVR ISVITNSLAD SDEPLVNINY NRYRVDMLKL GVNLYEVSTQ QLKRNRQLRS
LLKKARGRLH AKLALVDREW VLLGSMNLDP RSARLNTEFG VRVRSFELTQ ALLYAYQLDD
IEGVYRVVLM PDGENVQWIG TGDVDNEVLD SEPDSSLLTR LQLLLFSWFV PTDQL
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