| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1117 |
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| Symbol | |
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| ID | 7969639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1224231 |
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| End bp | 1225706 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791713 |
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| Product | xylulokinase |
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| Protein accession | YP_002943034 |
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| Protein GI | 239814124 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | [TIGR01312] D-xylulose kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTATCTGG GACTCGATCT CGGCACGTCC GAGCTCAAGG CGCTGCTGCT CGCCGGCGAC
CACCGCATCG TCGGCGTGGC GCGTGCGCCG CTCACGGTCG AGAGGCCAGA GCCGCTCTGG
TCGGAGCAGG CGCCTAGCCA ATGGTGGCAG GCGCTGGAGC AGGTGATGGC GGAGCTTCGC
GGCGCGCATG CTGAAGCGCT CTCGGCCGTG CGCGCCATCG GCCTGTCGGG CCAGATGCAC
GGCGCCACGC TGCTCGATGC GGCGGGCGAG GTGCTGCGCC CCGCCATCCT CTGGAACGAT
GGGCGCAGCG GCCCGCAGTG CGAGGCGCTT GCGCGTGCCG TGCCGCGGCT GGGCGAGATC
GCGGGCAACC TCGCGATGCC AGGCTTCACC GCACCCAAGC TGCTGTGGGT GCGCGAGCAC
GAGCCCGAAA TCTTCAACCG CACGGCGCGC GTGCTGCTGC CCAAGGACTG GCTGCGCTTC
ATGCTCAGCG GCGAGGCCGT CAGCGAGATG TCCGATGCGG CCGGCACGCT GTGGCTCGAC
GTCGGCGCGC GCGACTGGTC CGACGAACTG CTCGCGGCCG CCGGGCTCAC GCGCGGGCAC
ATGCCGCGGC TGGTGGAGGG CAGTGAAGTG TCGGCGCAGC TCAAGCCCGA GCTGGCCGCG
CGCTGGGGCG TGGGGAACGG CGCCGCTGCC GTGCTCATTG CCGGTGGCGC GGGCGACAAC
GCCGCCAGCG CCGTCGGCAT GGGGCTGGTG GAACCGGGGC AGGGCTTCGT GTCGCTCGGC
ACCTCGGGCG TGGTGTTCGT CTCGACCGAC CGCTTTTTGC CCAACCCCGC GCAGGCGATG
CATGCCTTCT GCCATGCGCT GCCCGGCCGC TGGCACCAGA TGTCGGTGAT GCTCTCGGCC
GCGAGCGCCG TGAGCTGGGC CGCCAAGGCC TTCCGGTTCG CCGACGAGGC CGCGCTGCTC
GAAGCGGCAG CGTCGGTCGC GCCCGCGCAG CGCGCGCGCT GCCCGCTGTT CCTGCCATAC
CTTTCGGGCG AGCGTTCCCC GCACAACAAT CCCAACGCGC AGGGCGTGCT GTTCGGGCTC
ACGCATGCGC ACGGCCCGGC GGAGATCGCC TATGCCGTGG TCGAGGGCGT GAGCTTCGGC
CTGCGCGACG GCTTCGACAC CCTGCGCCTG CCGGCCGGCA TGCCGCTGCG CGAAGTGGCG
CTGGTGGGCG GTGGCGCGCG CAGTGTCTGG TGGGGCCAGC TGCTGGCCGA TATCTTCGAG
CTGCCGCTCA CGCTGTACGC GGGCAGCGAG ACGGGTGGGG CGCTGGGCGC GGCCCGCCTT
GCCTGGCTGG CTGACGGCGG CACCGTGGCC GAGGTGTGCA CGCTGCCGCC GGTGAAGCAA
CAGCTGGTGC CTTCGCTTGA AGGTGCCGAT GGGCACAAGG CGCGTCATGC GCGCTTCCGG
GCGCTCTATA CGGCGCTGCG CGACCAGTTC CGTTAA
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| Protein sequence | MYLGLDLGTS ELKALLLAGD HRIVGVARAP LTVERPEPLW SEQAPSQWWQ ALEQVMAELR
GAHAEALSAV RAIGLSGQMH GATLLDAAGE VLRPAILWND GRSGPQCEAL ARAVPRLGEI
AGNLAMPGFT APKLLWVREH EPEIFNRTAR VLLPKDWLRF MLSGEAVSEM SDAAGTLWLD
VGARDWSDEL LAAAGLTRGH MPRLVEGSEV SAQLKPELAA RWGVGNGAAA VLIAGGAGDN
AASAVGMGLV EPGQGFVSLG TSGVVFVSTD RFLPNPAQAM HAFCHALPGR WHQMSVMLSA
ASAVSWAAKA FRFADEAALL EAAASVAPAQ RARCPLFLPY LSGERSPHNN PNAQGVLFGL
THAHGPAEIA YAVVEGVSFG LRDGFDTLRL PAGMPLREVA LVGGGARSVW WGQLLADIFE
LPLTLYAGSE TGGALGAARL AWLADGGTVA EVCTLPPVKQ QLVPSLEGAD GHKARHARFR
ALYTALRDQF R
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