| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1093 |
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| Symbol | |
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| ID | 7969615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1197858 |
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| End bp | 1198928 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791689 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_002943010 |
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| Protein GI | 239814100 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0250139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTGC TCCAGGTCAA GAACCTTGTG GTCGAGTTCC CGCACCGGCG CGGCACGCTG
CGCGCGCTCG ACGGAATTTC ATTCGACATC GCGCCCGGCG AAATCCTGGG CGTGGTGGGC
GAGTCGGGCG CCGGCAAGTC GCTCACGGGC GCGGCCATCA TCGGACTGCT CGAGCCGCCG
GGCCGCGTGG CCAGCGGGGA AATCCTGCTC GAAGGCCAGC GCATCGACAA CCTCGGCTTC
GATGCGATGC GGCCCATCCG CGGGCGCAAG ATCGGCGCGA TCTTCCAGGA CCCGCTGACC
TCGCTGAACC CGCTCTACAC CGTCGGCCGG CAGCTGGTGG AAACCATCCG CACCCACCTG
CCGGTGACCG AGGCCGAGGC GCGGCGCCGC GCCATCGGCC TGCTGCAGGA CACCGGCATT
CCGGCCGCCG AGCAGCGCAT CGACCACTTC CCGCACCAGT TCTCGGGCGG CATGCGCCAG
CGCGTGGTGA TTGCCCTTGC GCTGGCGGCC GAGCCCAAGC TCATCGTGGC CGACGAGCCG
ACCACGGCGC TGGACGTGTC GATCCAGGCG CAGATCATCC AGCTGCTCAA GCGCATCTGC
AAGGAGCACG GCGCCGCCGT GATGCTGATC ACGCACGACA TGGGCGTGAT CGCCGAAACC
TGCGACCGCG TGGCCGTGAT GTATGCGGGC CGCATCGCCG AGATCGGTCC GGTGCACGAA
GTGATCCACC AGCCGGCGCA TCCCTACACC TCGGGCCTGA TGGCCTCGAT TCCCGACATG
GCGAGCGACC GCGAACGGCT CAACCAGATC GACGGCGCGA TGCCGCGGCT CAATGCCATT
CCCGAGGGCT GTGCCTATAA CCCGCGCTGT CCGCGCACGT TTGCGCGCTG CCTCACGGAG
CGGCCCGAGC TCATGCACGC CGGCGCCACG CGCGCCGCAT GCTGGCTGCA CGATGCCACC
GATCCGCACA AGGGCCAGGC CGAGCTGGCG GCCCGGCACC ACGATGCGCA GCTGGCCGGC
GAGCGCGCCG TGCCCGATGC GGCCGCACCG CTTGCGGAGG TGAGCCGATG A
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| Protein sequence | MTLLQVKNLV VEFPHRRGTL RALDGISFDI APGEILGVVG ESGAGKSLTG AAIIGLLEPP
GRVASGEILL EGQRIDNLGF DAMRPIRGRK IGAIFQDPLT SLNPLYTVGR QLVETIRTHL
PVTEAEARRR AIGLLQDTGI PAAEQRIDHF PHQFSGGMRQ RVVIALALAA EPKLIVADEP
TTALDVSIQA QIIQLLKRIC KEHGAAVMLI THDMGVIAET CDRVAVMYAG RIAEIGPVHE
VIHQPAHPYT SGLMASIPDM ASDRERLNQI DGAMPRLNAI PEGCAYNPRC PRTFARCLTE
RPELMHAGAT RAACWLHDAT DPHKGQAELA ARHHDAQLAG ERAVPDAAAP LAEVSR
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