| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1021 |
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| Symbol | cbiD |
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| ID | 7971992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1115182 |
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| End bp | 1116279 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791617 |
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| Product | cobalt-precorrin-6A synthase |
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| Protein accession | YP_002942938 |
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| Protein GI | 239814028 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
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| TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.180704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGACA AGGGCGCGCC CCGCGGCACC CGCACCGGTT TCACGACCGG TGCGTGTTCG
GCCGCGGCGG CGCGCGCGGC GGTGATCGGC CTGGTCACGG GCCAGGTGCC CGACCACGTC
GAGTGCCTGC TGCCCAACGG TGATCTCGTG CGCTTCGCGG TACACGATGG CCGCGTCGAC
AGCGCGAGCG CGCACGCCAT GGTCATCAAG GACGCCGGCG ACGACCCCGA CTGCACCGAC
AAGGCCCATC TCACGGCCGA CGTGCGCCTG CTGCCCGATC TGGCGGGCCA GGTGGTGCTG
GCCGGCGGCA CCGGCGTGGG CACCGTCACC ATGCCGGGCC TCGGGCTCGC CGTGGGCGGG
CCGGCCATCA ACCCGGTGCC GCGCCGCAAC ATCGAGGCGA ACGTGCGCGC GGTGGGCGCG
GCGCTGCTCG ACGAGGTCGG CCTCGAAGTC GCGATCTCCG TGCCGCAGGG CGAGGAGATG
GCCAAGAAGA CGCTCAATGC GCGCCTGGGC ATCCTCGGCG GCATTTCGAT CCTCGGCACC
ACCGGCATCG TCAAGCCGTA TTCCACCGCC GCCTACCGCG CGAGCGTGGT GCAGGGCGTG
CAGGTGGCGG GCACGCTGGG CCATGGCGTG GTCGTGCTCA CGACCGGCGG GCGCACCGAG
AAATTCGTGA TGGCCGAAAT GCCGGAGCTG CCCGAGCCGG CCTTCGTGCA GATGGGCGAC
TTCCTGCGCT ACGCGATGGG CGCCGCGGTC AAGGCCGGAA TCCGGAAGGT GGTGATCGGC
GGCATGGTCG GCAAGCTCAC CAAGATCGCG CAGGGCGAGA CCATCACCCA CGCCGGCCGG
GCCGAGGTCG ACACCGGCCT GCTGGCCGAC CTGGCCGCCG GACTCGGCGC GCCGCCCGAT
GTGTGCGATG CGATCCGCGG CAACGAGACC GCGCGCTATG CCGGCGAGCG CATGGACGCG
CTCGGGCTCG GCACCGCCTT TCACACGGCG CTCGCGCAGC GCGTCATCCA GACGCTGCGC
ACGCGCTACC CCGACCAGTT CGAACTGAAG GTGCTGGTCT GCGACTTCGA AGGCCGAAAG
ATCGCGGAGG CCCCGTGA
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| Protein sequence | MMDKGAPRGT RTGFTTGACS AAAARAAVIG LVTGQVPDHV ECLLPNGDLV RFAVHDGRVD
SASAHAMVIK DAGDDPDCTD KAHLTADVRL LPDLAGQVVL AGGTGVGTVT MPGLGLAVGG
PAINPVPRRN IEANVRAVGA ALLDEVGLEV AISVPQGEEM AKKTLNARLG ILGGISILGT
TGIVKPYSTA AYRASVVQGV QVAGTLGHGV VVLTTGGRTE KFVMAEMPEL PEPAFVQMGD
FLRYAMGAAV KAGIRKVVIG GMVGKLTKIA QGETITHAGR AEVDTGLLAD LAAGLGAPPD
VCDAIRGNET ARYAGERMDA LGLGTAFHTA LAQRVIQTLR TRYPDQFELK VLVCDFEGRK
IAEAP
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