| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0962 |
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| Symbol | |
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| ID | 7970137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1058502 |
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| End bp | 1059890 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791558 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_002942879 |
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| Protein GI | 239813969 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACCG CCCTCACAGA AAAGTTCTCC CGCCTCGTCA AGACGATGAG CGGCCAGGCG
CGCATCACCG AAAGCAACGT GCAGGACATG CTGCGCGAAG TGCGCATGGC CCTGCTCGAA
GCCGACGTGG CGCTGCCCGT GGTGCGCGAT TTCGTCGCCC GCGTGAAGGA AAAGTCGCTC
GGCCAGGAAG TGCTGGGCTC GCTCAAGCCG GGCCAGGCGC TGGTCGGCAT CGTCAACCGC
GAGCTCGCCG CCACCATGGG CGAGGGCGTG TCCGACATCA ACCTGGCGGC GCAGCCGCCG
GCCGTGATCC TCATGGCCGG CCTGCAGGGC GCGGGCAAGA CCACCACCAC CGCCAAGCTG
GCCAAGCACC TGATCGAGAA GCGCAAGAAG AAAGTGCTCA CGGTCTCCGG CGACGTCTAC
CGGCCCGCCG CCATCGAGCA GCTCAAGATG GTCACCAAGC AGGCCGGCGC CGAATGGTTC
CCGAGCACGC CCGACCAGAA GCCGCTCGAC ATCGCACGCG CGGCGCTCGA CCACGCCAAG
CGCCACTTCT TCGACGTGCT GCTGGTCGAC ACCGCGGGCC GCCTGGCCAT CGACGAAGTG
CTGATGACCG AGATCAAGCA GCTGCACGGC GCGCTCGATC CGGTCGAGAC GCTGTTCGTG
GTCGACGCCA TGCAGGGCCA GGATGCGATC AACACGGCCA AGGCCTTCAA GGAAGCGCTG
CCGCTCACCG GCATCATCCT GACCAAGACC GACGGCGATT CGCGCGGCGG CGCGGCGCTG
TCGGTGCGCC AGGTGACGGG CGTGCCGATC AAGTTCGCGG GCACCAGCGA GAAGATCGAC
GGCCTCGAGG TGTTCGACGC CGAGCGCCAT GCGGGCCGCA TCCTCGGCAT GGGCGACATC
GTCGCGCTGG TCGAGCAGGT CACGGCCGGC GTCGACGTGG CGGCGGCGCA GAAGCTCGCG
GCCAAGGTCA AGAGCGGCGC GGGCTTCGAC CTGAACGACT TCCTCGGTCA GTTGCAGCAG
ATGAAGCAGA TGGGCGGCCT CTCGAGCCTG ATGGACAAGC TGCCGCAGCA GATGGCCGCC
AAGGCCACCG AGGCCGACAT GACCCGCGCC GAGCGCGACA TCCGCCGCAA GGAAGGCATC
ATCCAGAGCA TGACGCCGCT GGAGCGCCGC AAGCCCGAGC TGCTCAAGGC CACGCGCAAG
CGCCGCATCG CGGCCGGCGC GGGCGTGCAG GTTCAGGAAG TGAACCGCCT GCTCAACGAG
TTCGAGCAGA TGCAGGGCAT GATGAAGAAG ATGAAGGGCG GCGGCCTCAT GAAGATGATG
AAGAAGATGG GCGGCATGAA GGGGATGGGC GGGATGGGTG GGCCCGGTGG GCCGAAGCTG
CCGTTCTAA
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| Protein sequence | MATALTEKFS RLVKTMSGQA RITESNVQDM LREVRMALLE ADVALPVVRD FVARVKEKSL
GQEVLGSLKP GQALVGIVNR ELAATMGEGV SDINLAAQPP AVILMAGLQG AGKTTTTAKL
AKHLIEKRKK KVLTVSGDVY RPAAIEQLKM VTKQAGAEWF PSTPDQKPLD IARAALDHAK
RHFFDVLLVD TAGRLAIDEV LMTEIKQLHG ALDPVETLFV VDAMQGQDAI NTAKAFKEAL
PLTGIILTKT DGDSRGGAAL SVRQVTGVPI KFAGTSEKID GLEVFDAERH AGRILGMGDI
VALVEQVTAG VDVAAAQKLA AKVKSGAGFD LNDFLGQLQQ MKQMGGLSSL MDKLPQQMAA
KATEADMTRA ERDIRRKEGI IQSMTPLERR KPELLKATRK RRIAAGAGVQ VQEVNRLLNE
FEQMQGMMKK MKGGGLMKMM KKMGGMKGMG GMGGPGGPKL PF
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