Gene Vapar_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0947 
Symbol 
ID7970122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp1041662 
End bp1042261 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content69% 
IMG OID644791543 
Producthypothetical protein 
Protein accessionYP_002942864 
Protein GI239813954 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACGT CCACCAAGCG CGAGATTGCC GCCGCCGCAG CCCGCCTCGT CGTCGAGGAG 
GGGCTGGAGT ACGGCCCGGC CAAGCGCCGG GCGCTGCGCG ACCTGGGCCT GTCCTCGCGC 
ACGGCGCTGC CGAACAACGA CGAGGTGGAG GCCGAGGTGC GCGACTACAT CGCGCTCTAT 
TGCGCCGACA CCCAGCCACA GGAACTGCGT GCGCTGCGGC TGCTCGCGCT CGAATGGATG 
GAGCGCATGG CGGCGTTCCG CCCGCATGTG GGCGGCGCCG TCTGGCACGG CACCGCCACG 
CGGCTGTCAG ACATTTATAT TCAATTGTTC TGCGATGATT CCAAGTCGGC CGAGATTGCC 
CTGATCGACC ACCACGTGGA CTACGAGCCG CGCATGGTCA CCGGGTTTCA CGGCGAGCAG 
GTGGAAGCGC TGAGCGTGCA TGCCGCAAGC CGCGCGCTGG GCGAGGAAAT CGGGGTGCAC 
CTGCTGGTGT ACGACCTCGA CGACCTGCGC GGCGCGCTCC GGCCCGACGC CCAGGGCCGC 
ACGCCGCGTG GCGACCTCGC GGCGCTGCGC CGGCTGATCG AAAGTGAAAA GGACAAGTGA
 
Protein sequence
MDTSTKREIA AAAARLVVEE GLEYGPAKRR ALRDLGLSSR TALPNNDEVE AEVRDYIALY 
CADTQPQELR ALRLLALEWM ERMAAFRPHV GGAVWHGTAT RLSDIYIQLF CDDSKSAEIA 
LIDHHVDYEP RMVTGFHGEQ VEALSVHAAS RALGEEIGVH LLVYDLDDLR GALRPDAQGR 
TPRGDLAALR RLIESEKDK