| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0890 |
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| Symbol | |
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| ID | 7972106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 977773 |
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| End bp | 978777 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644791486 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942807 |
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| Protein GI | 239813897 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.451004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGC GCGACGACAA CCGGCCCAGC CGCATGCCAC TGAGCCAGTA CGAGTTCCTG
GTCGATCGCT TCGCGGTGCT CAACACCGGA AGAGTCGGCG TCGTCGATGC GCTGCTGACC
AAGCAGTACC TGGAGGACAA CCTGGGCCCC GAGGATTTCG AGCGGGCGAA CAAGATGGTG
CAGGTGGCGC GGGACAGCCT CTTTGGTCCG AAGCGCGGGC GCATGAAGAT CCCTGGCCTG
CTGCGCATTC CCGACGTGAT AAGGGTCAAG GACCGCTTTG CGAAGGGGGC GGCACGCTAT
GCGCCGGCGA ATCTGGAGTT TGTGATTGAA ATGAAGTTTG AGGGGGATTC GATGTCAGAT
GAACAACGAA TCTCGTATCT CTTGATCGCT GGAAGCGACA TCAAACTTCG CTTGCTCAAT
ACCGGAGTCT GCAAAATCGA ACGGCATCGC CGCCGCGGCT GGTTGGAGAA GGCACGCCAG
ACGGAACCCG TGTTCAAGGA CGTGCATGTC ACCGGCCCCT CTTCGGCCCG GGCGCTGGCC
TTGCAGCAAT CCATCGGCGA ACTGAGCCTG CTCATCGGCG ACATCGAGCA AGAGCATGCC
AAGGTACGGC GGCTGTTCCA GCCGATTCCG GCCGACGTGC CGCAGATGCG ACCGGTGGAC
CCCGCCGCCG AGCGGCGGGC GCAAGAGCAA CGCGAGCATC AGCGCGCCAC CCTGGAACTG
AGCCTGGCCG CGCCGATGGC GGGGGCGGCG GTCGGCACCA TCGCGGTGGC CGGAAGTACG
TTGCTCGCAG GCGGCAGCAC GCTTGGCGAG GGAGCCAGCA TCATTGCGGC TCAGAGCGGC
AAGCTGATCC AGTTTCCCGT CGGACGGGTC GCGGTGGGAA CGGCCGTCGC CAATGCGGCC
ATCTTCGAGG TGGCGGCAAA GCCGACAACC TCCACGGGTA CCGGCGCTTC GGGGGAAGCC
TTCGACATCT ACGCCCCCAT CCATCTGGTC TACATCGACG AATAA
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| Protein sequence | MSKRDDNRPS RMPLSQYEFL VDRFAVLNTG RVGVVDALLT KQYLEDNLGP EDFERANKMV
QVARDSLFGP KRGRMKIPGL LRIPDVIRVK DRFAKGAARY APANLEFVIE MKFEGDSMSD
EQRISYLLIA GSDIKLRLLN TGVCKIERHR RRGWLEKARQ TEPVFKDVHV TGPSSARALA
LQQSIGELSL LIGDIEQEHA KVRRLFQPIP ADVPQMRPVD PAAERRAQEQ REHQRATLEL
SLAAPMAGAA VGTIAVAGST LLAGGSTLGE GASIIAAQSG KLIQFPVGRV AVGTAVANAA
IFEVAAKPTT STGTGASGEA FDIYAPIHLV YIDE
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