Gene Vapar_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0887 
Symbol 
ID7972103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp974328 
End bp974618 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content63% 
IMG OID644791483 
ProductAntibiotic biosynthesis monooxygenase 
Protein accessionYP_002942804 
Protein GI239813894 
COG category[S] Function unknown 
COG ID[COG1359] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCCGA TCAACGTCAT CATCACTTTC GAAGCCAAAC CCGAGCGCGC ATCCGCGTTC 
GCCGAACTCA TGCAGCAGGT CAAGCTGTCG CTGCCATCAG CGGATGGCTG CCGTGGTGTG
CGGCTGTTCG GGCACGCCGA CAGCGACAGC GTGTTCACGC TGGTCGAGTC GTGGGAATCG
CGCAGCCATC ATCAGGCGCA TATCGCGGGC GTGGTGTCGT CCGGCGCATG GGACGCGATA
GCGGCCGAGT TGGCTCGCGA GCCTGTCAGC TGCTATTGCG ACGAACTCTG A
 
Protein sequence
MDPINVIITF EAKPERASAF AELMQQVKLS LPSADGCRGV RLFGHADSDS VFTLVESWES 
RSHHQAHIAG VVSSGAWDAI AAELAREPVS CYCDEL