| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0825 |
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| Symbol | |
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| ID | 7972040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 908548 |
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| End bp | 909990 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791423 |
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| Product | Amidase |
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| Protein accession | YP_002942744 |
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| Protein GI | 239813834 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCCAG CCGATCTGCT CGACCTCTGC GCCACCGAAC TCTCGCGCCG CATCGCGGCC
CGCAGCGTGT CCTGCCATGA GCTGATGCAG GCCTCGCTGG CCCGCATCGA GGCGCTCAAC
CCGCGCTTCA ACGCGATCGT CTCGCTGCGC GAACCCGGTG TGCTGCTGGC CGAAGCCCGC
GAGCGCGATG CCGAACTGGC GCGCGGCGAA CGGCGCGGCT GGATGCATGG CTTTCCCTTG
GCGGTGAAGG ACCTGAGCCA TGCGGCCGGC CTGCCGACCT CCATGGGCTC GCCGCTTTCG
CCGCGCTCGC CGGCGCGCAT TGACAGCCTG CACGTCGCGC GCATGCGCGC AGCCGGCGCC
ATCGTGATCG GCAAGACCAA CACGCCCGAA TTCGGCCTGG GCTCGCACAC CTACAACACG
GTGTTCGGCA TCACGCGCAA CGCCTATGCG CCGGAGCGCA GCGCCGGCGG CAGCAGCGGC
GGCGCGGCCG TGGCGCTGGC CCTGGGCATG CTGCCGGTGG CCGACGGCAG CGACATGATG
GGCTCGCTGC GCAACCCGGC CGCCTTCAAC AACGTGATCG GCATGCGGCC CTCGCGCGGA
CGCGTGCCCG GCGACCCCGA GCAGGAACTC TTCTTCCAGC AGCTGGGCAC CGAAGGCCCG
ATGGGCCGCA CGGTGGAAGA CACCGCGCGG CTGCTCGCGG TGCAGGCGGG CTTCGATGCG
CGCGTGCCGC TGTCGTCGCC GCAGGCGCTG CCCTCGGCCG ATGCCATCGC GCTCGACGGC
GACGGAAAAG GCCTGCGCAT CGGCTGGCTC GGCAGCCTCT GGCCCGGGCT GCCGCTCGCG
CCCGGCATCC GCGAACTGGG GGAGCAGGCG CTCGGCACCT TCCGCACCAT CGGCTGCGAG
GTCGAGCCCT GCACGCTCGA CGTGCCGCGC GAGCACAACT GGAGCGCCTG GCTGCGGCTG
CGCCAGCTGC TGGTGGGCGG CAAGCTCGGC GCGTATCTCA GCGACCCCCA GCTGTTCGCG
CAGCTCAAGC CGGAAGCGCA GTGGGAAATC GAGCAGAGCC GGCATCTGGA CGCGGCCTCG
CTCTACCAGG CTTCGCTCTA CCGCTCGAAC GTGTACCGCG CGTTCTTCAG GCTGTTCGAG
CGCTTCGATT TCGTGCTGGC GCCGACCGCG CAGGTGTTCC CCTTCGACGC CGAGCTGCAC
TGGCCCGCCG AAGTGGCCGG CGTGCCGAGC GACACCTACC ACCGCTGGAT GGAGATCGTG
ACGCCGTTCA CGCTGGCGGG CCTGCCGACG CTCAACGTGC GCGCGGGTTT CGGCGAAGGC
GGGCTGCCGA TGGGCCTGCA GCTGGCCGGG CCGATCCATG CGGACCTGGA CGTGCTGCGG
CTCGGGCATG CGTATGACCA GGCCTGCGGC TGGGCCTCTC ATCGCCCCCC GATATTGGGT
TGA
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| Protein sequence | MPPADLLDLC ATELSRRIAA RSVSCHELMQ ASLARIEALN PRFNAIVSLR EPGVLLAEAR
ERDAELARGE RRGWMHGFPL AVKDLSHAAG LPTSMGSPLS PRSPARIDSL HVARMRAAGA
IVIGKTNTPE FGLGSHTYNT VFGITRNAYA PERSAGGSSG GAAVALALGM LPVADGSDMM
GSLRNPAAFN NVIGMRPSRG RVPGDPEQEL FFQQLGTEGP MGRTVEDTAR LLAVQAGFDA
RVPLSSPQAL PSADAIALDG DGKGLRIGWL GSLWPGLPLA PGIRELGEQA LGTFRTIGCE
VEPCTLDVPR EHNWSAWLRL RQLLVGGKLG AYLSDPQLFA QLKPEAQWEI EQSRHLDAAS
LYQASLYRSN VYRAFFRLFE RFDFVLAPTA QVFPFDAELH WPAEVAGVPS DTYHRWMEIV
TPFTLAGLPT LNVRAGFGEG GLPMGLQLAG PIHADLDVLR LGHAYDQACG WASHRPPILG
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