| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0800 |
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| Symbol | |
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| ID | 7971852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 881544 |
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| End bp | 882878 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644791398 |
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| Product | MmgE/PrpD family protein |
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| Protein accession | YP_002942719 |
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| Protein GI | 239813809 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.453247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAGCG CTGAACACGA TCCGCAACGC GCCGTGCTGC AGGCCACGGT GGCGCTGCAC
GCGGCGCAGC CGGCCACCGC CGAGGCCGCG TTGCAGGCGC GGCGCCTGCT GGTCGACACG
GCCGGCTGCG CGCTCGCGGG CCGGCATGCG AACGAGGTGC AGCGCCTCGA AGCCGCACTC
GCAGCCTGCG AACCCGGCGA TTTTTCTTTT CCCGGCGGCG CGCCGATGTC GGTGCAGGCC
GCCGCGCAAG TGCTGGCCAT GGCCGCGACC TGGGACGAGG CTTGCGAAGG CCACGCACTC
GCGCACGGCC GGCCCGGCGT GCCGCTGGTG GCGGCGCTGC TGCCGCTCGC GCTGCGGCGG
GGTGCGAGCC TTGGCGAGTT CATCGATGCC TTCGTGCTCG GCTACGAGGT CGGCGCGCGC
TGCGGCGCCT GGCTGCGCAT CCGGCCCGGC ATGCATGTCG ATGCGAACTG GCCCGCGCTG
GGCGTGGCGG CCGGCGTGGC GCGCCTGCTC GCGCTGCCGC CGGCGGGCAT CGTGCAGGCT
ATCGACATCG CGGCCTGCCA GCTCGCGACC AGCCTCTACC TGCCGGTGCA GCAGGGCCGC
ACTGCGCGCA ACACCTACCT CGGCCACAGC GCATCGCTGG GGCTGCAGGC GGCCTTTGCC
AGCGCAGCGG GCATCGACGC GCCGGACGGT GCGCTGGCTC ACTACGCGCA CACGCACTCG
GCCGCGACCG CGCAGCCGCT GCCCGATGCG GCGACCCTGC TGCTGCGCGA CGCCTACCTC
AAGCCCTTCG CGGCCGTGCG CCACGTGCAC TACGGCGCGA CGGCCGCGCG CCGCATCCGC
GAGCAGCTGG CCGGCGACAC CACCGACATC GACCGCATCG TGCTCAGGGT GTACGACGAG
GCGATCGTCT ACTGCGGCAA CCGCGCGCCG CGCACGCCGA TCCAGGCGCA GTTCAGCCTT
TCTTTCGGTG TCGCGGCGAT GCTGCGCTTC GGCGATGTCG ATCCCTCGGC CTATGCCGCG
CCGCGCTTCG ACGATGCCGA GCTGCGCCGG CTCGAAGCCC TGGTCGTGCT CGAAACCGAT
GCCGGCCTCA CGGCGCGCAA GCAGCGCGGC GCCACGCTCC AGGTGTCGCA CGCGGGCGGC
ACGCTCGCGC AGACCGTGGG CACCATCGCG GGCGATGCCG CCCATCCGCT CGACCGCGCG
GCGCTCGCCG CCAAGTTCGC GCACTACGCC GCGCACAGCG TGCCGGCCCC GCAGGCCGCG
CGCTTCTGCG AGGGCGTGCT GGACGCGCCC GCCGGCACTC GTCTTCGTGC GCTGTGGCAG
CAGCTTGCCG CCTGA
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| Protein sequence | MHSAEHDPQR AVLQATVALH AAQPATAEAA LQARRLLVDT AGCALAGRHA NEVQRLEAAL
AACEPGDFSF PGGAPMSVQA AAQVLAMAAT WDEACEGHAL AHGRPGVPLV AALLPLALRR
GASLGEFIDA FVLGYEVGAR CGAWLRIRPG MHVDANWPAL GVAAGVARLL ALPPAGIVQA
IDIAACQLAT SLYLPVQQGR TARNTYLGHS ASLGLQAAFA SAAGIDAPDG ALAHYAHTHS
AATAQPLPDA ATLLLRDAYL KPFAAVRHVH YGATAARRIR EQLAGDTTDI DRIVLRVYDE
AIVYCGNRAP RTPIQAQFSL SFGVAAMLRF GDVDPSAYAA PRFDDAELRR LEALVVLETD
AGLTARKQRG ATLQVSHAGG TLAQTVGTIA GDAAHPLDRA ALAAKFAHYA AHSVPAPQAA
RFCEGVLDAP AGTRLRALWQ QLAA
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