| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0737 |
|---|
| Symbol | |
|---|
| ID | 7971789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 808504 |
|---|
| End bp | 809331 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644791335 |
|---|
| Product | Creatininase |
|---|
| Protein accession | YP_002942656 |
|---|
| Protein GI | 239813746 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1402] Uncharacterized protein, putative amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.400198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAT CCCCGGTATC CCTGCCCCGC TACTGGTCTC AACTGACGAC GCGCGACTTT
GCGGCGCTCG ATGTGGCAGC CACGGTCGCG GTGCTGCCCC TCGGTGCCAC CGAGCAGCAC
GGGCCCCATC TGCCGCTGGG CGTGGACACG GTGCTGGCCG ACGGCATCGT GGCCGCGTCG
CTGCCGCTGC TGCCGGCCGC GCTGCCGGTG CTGTTCTTGC CGACGCAGCA GATCGGCCTG
AGCCCCGAGC ACGCGCGTTT TGCGGGCACG CTCACGCTGT CGGCCGAGAC GCTGATCCGC
ATGTGGAAGG AAATTGGCGC GGGCGTGGCG CATGCCGGCG TGAAGAAGCT GGTGCTGTTC
AACGCGCACG GCGGCCACGT GGGCGCGATG GACATCGTGG CGCGCGAGCT GCGCGCGGCG
CACGGCCTCA TCGTCTACAG CGTGAGCTGG TTCAACCTGC CGCTGGGCGA TGCGGGCGCG
CAGTTCGGCG CCGGCGAGCA CCGCTTCGGC GTGCATGCGG GCGAGATCGA GACCTCGATG
ATGCTGGCGC TGGCGCCGCA GCAGGTGCGC ATGGCCGAGG CAAAGAATTT CCGCTCCACC
TCCGAGCAGC GCGCGGCCGA CTACGCGATC CTCGGCAACG GCAAGAGCGC CAAGCTCGGC
TGGGCCATGG AGGACTACAA CGCACAGGGC GCAGCCGGCA ACGCCGCCGC CGCAACGGCG
CCGCGCGGGC AGGCTGTGGT CGATGCGGCT GCGCAGCAGC TCGCGCTGTT GCTAGCGGAG
GTGTCTCGGC TGCCGCTGGA CACGGCTCGT ACGGGGCCGC TGCTTTAG
|
|---|
| Protein sequence | MNASPVSLPR YWSQLTTRDF AALDVAATVA VLPLGATEQH GPHLPLGVDT VLADGIVAAS
LPLLPAALPV LFLPTQQIGL SPEHARFAGT LTLSAETLIR MWKEIGAGVA HAGVKKLVLF
NAHGGHVGAM DIVARELRAA HGLIVYSVSW FNLPLGDAGA QFGAGEHRFG VHAGEIETSM
MLALAPQQVR MAEAKNFRST SEQRAADYAI LGNGKSAKLG WAMEDYNAQG AAGNAAAATA
PRGQAVVDAA AQQLALLLAE VSRLPLDTAR TGPLL
|
|---|
| |