| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0709 |
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| Symbol | |
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| ID | 7974672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 772392 |
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| End bp | 773915 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644791308 |
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| Product | Amidase |
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| Protein accession | YP_002942629 |
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| Protein GI | 239813719 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCC ACACCGAATT GATCGAACAA ACCGCCGTCG AACTGCGCCG GCTCATCGGC
AGCAAGGCGG TTTCGCCGGT CGAGCTGCTC GAAGCCTGCA TCGCGCGCAT CGAGCGCGTG
AACCCCTTCA TCAACGCCGT GACCGCCACC TGCTTCGAGC GCGCGCGGGC CGAGGCCCGG
GCGGCCGAGA GCGCCGTGAT GCGCGGCGAT GCGCTGGGGC TGCTGCACGG CCTGCCGCTC
GGCGTGAAGG ACCTCGAACC CACCGAAGGC CTGCTCACCA CCTGGGGCTC CGCGATCTTC
CGCGACCACG TGCCGCAGGA GGACATCGAG CTGGTGGCCC GCCTTCGCAG GGCCGGCGCC
ATCGTGGCGG GCAAGACCAA CGTTCCCGAA ATGGGCGCCG GTGCCAACTC GCGCAACGAG
GTGTGGGGCG CCACCGGCAA CCCCTTCAAC CCGAACCTCA ATGCCGGCGG TTCTTCCGGC
GGCTCGGCCG CCGCGCTGGC CTGCGACATG CTGCCCGTGT GCACCGGCTC CGACACCGGC
GGCTCGCTGC GCATTCCGGC CGCCAAGTGC GGCGTGGTGG GCTTCCGGCC TTCGCCGGGC
ATCGTGCCGA GCGTGCGCAA GCTGCTGGGC TGGACGCCGA TCTCGGTCGT GGGTCCGATG
GGCCGCACGG TGGAAGACGC CTGCCTGCAG ATGGCCGCCT CCGCCGGCAT GCACGCGGGC
GATCCGCTGA GCTATCCGCT CGATCCGCTC GGCTTCCTGA AGCCGGCCGG CATCGACCTC
AGCAACCTGC GCGTGGCGTG GACCGAAGAC TTCGGCACCT GCGCGGTGGA CGAAGGCATC
CGCACCACCA TGCGCAAGAA GATCGGCGCG ATGCAGCACC TCTTCAAGCG CTGCGACAGG
ATCGAACTCG ACCTCGGCGA AGCGCACCGC TGCTTCGACG TGCTGCGCGC CGAGGCCTTC
GTGGCCGGCA TGCATGCCGC CTACCAACGC GACCCAGCCA GCCTGGGCCC CAACTCCCGC
GCCAACTACG AGATGGGCGC GCAGATGAGC CTGCTCGACA GCGCCTGGGC CCAGGCCGAG
CAGACCCGGC TCATCAAGCG CTTCCAGGCC GCCTTCGCCG ACTACGACCT GATCCTTTCG
CCCACCACGC CGGTGTCGCC CTTTCCGTGG ACGCAGCTCT ATGCGGACAC CATCAACGGC
GAGAAGCAGG CCAACTACTA CCGCTGGCTC GCGCTGACCT ACGTGGTCAC GCTGACCACG
CATCCGGCGC TGGCGCTGCC CTGCGGCCTC GACCATGCGG GCATGCCCTT CGGGCTGCAG
ATCGTGGGCG CGTTCAGGGC CGACCACCAG GTGCTGGGCG CGGCGCACGC CATGGAAAAG
GCCTTCGCGG CCGACGCGCA ATTGCGCCGC CCGCGGCCCG ACATCGCGTC GCTGCGCGCG
GCCGAACCTG CGCTCAGGTC GATCGTCACG GCGCCGCCCG GTGCGGGCCG CAGCGCGCCC
GCAGCCGCCA CCTCCGCGGT CTGA
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| Protein sequence | MSTHTELIEQ TAVELRRLIG SKAVSPVELL EACIARIERV NPFINAVTAT CFERARAEAR
AAESAVMRGD ALGLLHGLPL GVKDLEPTEG LLTTWGSAIF RDHVPQEDIE LVARLRRAGA
IVAGKTNVPE MGAGANSRNE VWGATGNPFN PNLNAGGSSG GSAAALACDM LPVCTGSDTG
GSLRIPAAKC GVVGFRPSPG IVPSVRKLLG WTPISVVGPM GRTVEDACLQ MAASAGMHAG
DPLSYPLDPL GFLKPAGIDL SNLRVAWTED FGTCAVDEGI RTTMRKKIGA MQHLFKRCDR
IELDLGEAHR CFDVLRAEAF VAGMHAAYQR DPASLGPNSR ANYEMGAQMS LLDSAWAQAE
QTRLIKRFQA AFADYDLILS PTTPVSPFPW TQLYADTING EKQANYYRWL ALTYVVTLTT
HPALALPCGL DHAGMPFGLQ IVGAFRADHQ VLGAAHAMEK AFAADAQLRR PRPDIASLRA
AEPALRSIVT APPGAGRSAP AAATSAV
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