| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0602 |
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| Symbol | |
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| ID | 7973587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 660681 |
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| End bp | 661424 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791210 |
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| Product | phage-type endonuclease |
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| Protein accession | YP_002942531 |
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| Protein GI | 239813621 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5377] Phage-related protein, predicted endonuclease |
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| TIGRFAM ID | [TIGR03033] putative phage-type endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGATT CAGACAGCGG CACGCAACGC CTCCGAGCGG CTCGCCTGCG GCCACGTGCC
CCTACATTGC AACTGGTCCC GAATACCCAC CCACGGGAAG CCGTGCCGCA GCGTTGGCCG
AACCTGCGCG AAGCTGGGAT CGGCCACCTC GATGCCGCCG CTGCCGTGGG GCGCGACCCC
TTCAAGTCCC CCGTCCGGCT GTGGATGGAG AAGACCGAAC GCCGCGACAT GCAGCAGCCG
GCACCGGTGC AATCAAAGCC ATCGACACCC GACGACGCCG GCTACTGGGG CCGCCTGCTC
GACCCCATCG TCGCGGCGCA CTACACCCTA CGTACGGGAC GCCCGCTCCG ACGCACGAGC
ACCTTGCTGT GTCACCCGCA ACACCCCTGG ATGTGGACCC ACCCCGGCCG CGAGATTGCC
GGCTGCAGTG ATGTTCAGCT CCTGGAGTGT CGCTGCGTCG GCTTGGCCGA AGCCCTCCAC
TGGGATCAGG GCCTTCCCGG CTACGTGCGG ATCCAGAGCT TGCACCAACT GGCTGTTGCG
GGTGCCAACG CCATTGACGT CGTGGCGCTG ATCGGTGGCG AGGACCTGCG CATCTTCCGC
GTCGAGCGGG ATGAGCTCGA GATCGCTCGT CTCATCGAGG CCGAGCGCGA GTTCTGGCTC
TGCGTTGAAC TCGATCAGGC GCCGCATGCG AGGGAAGGGG GCGTCTCTCT CGGCTGGCCT
GCTGCGCAAG CTCCCGCCTC TTGA
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| Protein sequence | MFDSDSGTQR LRAARLRPRA PTLQLVPNTH PREAVPQRWP NLREAGIGHL DAAAAVGRDP
FKSPVRLWME KTERRDMQQP APVQSKPSTP DDAGYWGRLL DPIVAAHYTL RTGRPLRRTS
TLLCHPQHPW MWTHPGREIA GCSDVQLLEC RCVGLAEALH WDQGLPGYVR IQSLHQLAVA
GANAIDVVAL IGGEDLRIFR VERDELEIAR LIEAEREFWL CVELDQAPHA REGGVSLGWP
AAQAPAS
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