Gene Vapar_0590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0590 
Symbol 
ID7973574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp649421 
End bp650029 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content71% 
IMG OID644791197 
Producthypothetical protein 
Protein accessionYP_002942519 
Protein GI239813609 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTGT TGCCCGATTC GATGGTCGGC TGGATCGTCA TTGCCGTGCT GCTGTTCTGG 
TTCGTGGGCG CGTACAACCG GCTCGTGCGG CTGCGCGCGG CCGTGCTCCA GGCCTATGCG 
ACGCTCGACG CGGCCCTGCG GAAGCAGCTG GATTTCGTCC AGGCCAGCAT CACGGCCGCC 
CTGCCGGAAA AGGACGCGTC GAGCCACTCG TCGGCCGTGG CGCCGCTGCA GGCCGCCACC 
AACCAGCTTG CGACCCTGCT GGGCGCCACC CGCCTGCATC CGCTCGACCC CGGCGGCATG 
GCCGCGCTGG CCACGGCGCT GCAGGTGCTG ATCACGGCCT GGCAGCGCCA GCATCCGGAC 
GCGGTGACGG TCTTCGAGGC GGACGGAACG CTCTCGCGGC CGGCGCCGCT GCTGCCGGCC 
GGCGCCGGTG CCGGTTCGGC CTCCGGCACA CTCGAACCCA TGGCCTGGCC CGAGCCTTCG 
GCCGCCGCGG AAATCGCACG CAGCCAGTTC AACCTGGCGG TGGGGCAGTA CAACGCCGCC 
ATCGTCCAGT TTCCGGCGTT GCTGGTGGCA TGGATGGTGC GTTTGCGTCC GGCCGCGCCG 
CTGCTTTGA
 
Protein sequence
MSVLPDSMVG WIVIAVLLFW FVGAYNRLVR LRAAVLQAYA TLDAALRKQL DFVQASITAA 
LPEKDASSHS SAVAPLQAAT NQLATLLGAT RLHPLDPGGM AALATALQVL ITAWQRQHPD 
AVTVFEADGT LSRPAPLLPA GAGAGSASGT LEPMAWPEPS AAAEIARSQF NLAVGQYNAA 
IVQFPALLVA WMVRLRPAAP LL