Gene Vapar_0534 details

Gene Information

• Locus tag: Vapar_0534
• ID: 7972944
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 594306
• End bp: 594992
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 644791137
• Product: hypothetical protein
• Protein accession: YP_002942463
• Protein GI: 239813553

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCACG CTACTGCCGC CCCTCTCGAC GCCAGCCGCC CGAAGGCGCA GCCGCGCACC 
CACAAGCAGG CGCCGCCGCG GCGGCCTTCG CCGATCGCCG CCGAATCCTG CGTGGGCGTG 
GTGGTGGCCG GTGCGGCCGA TGAACTGCGC GTGGTCGCAG GCGACTTCGG CGCCCGCGCG 
CGCCTCGCTG CCAGCTGCCT GCTCGTGCCG CAGCCCGGCG ACACGGTGGC GTGCTTCCGG 
GTGGCACCTG ACGAGATCTG GATCCTTGCG GTGTTGGAGC GCGAAGCCGG CGCGCCGCGG 
GTGCTGCGCA GCCACGGCCC GACGCGGTTC GAGGTCACCG ACGGCGCGCT CGAGCTGCAT 
GCGCCGGCGA TCGCGCTGAG TTCGCGGCGC TTCGCGCTGG ACAGCGCGCG CACCGACATC 
GCCAGCGACG ATCTCGAATT CGCCGGAGGC CAGGTCCGCA TCGTGGCCGG GGCAATGCGG 
CTGATCGGAT CGGCGCTTTC CACGGTGTTC GACCGGGTCA CGCATTTCAG CAAGCACCAT 
GCGCGCACCA CCGAAGGCCT GGACCGCGTG CATGCGGCGC ATCTGGAGAT GGAAGCGCAG 
CAGCTCGTGC ACATCAGCGC GGAGCACGCA CTGGTGAACG GCAGCAAGCT GGTCAAGGCG 
CGCGGCGGGC AGATCCATTT CGGATAG 

 

Protein sequence

MTHATAAPLD ASRPKAQPRT HKQAPPRRPS PIAAESCVGV VVAGAADELR VVAGDFGARA 
RLAASCLLVP QPGDTVACFR VAPDEIWILA VLEREAGAPR VLRSHGPTRF EVTDGALELH 
APAIALSSRR FALDSARTDI ASDDLEFAGG QVRIVAGAMR LIGSALSTVF DRVTHFSKHH 
ARTTEGLDRV HAAHLEMEAQ QLVHISAEHA LVNGSKLVKA RGGQIHFG