| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0505 |
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| Symbol | |
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| ID | 7972915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 552840 |
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| End bp | 553940 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791108 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_002942434 |
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| Protein GI | 239813524 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.143613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAACTGC CGCCGCCCCT GTTCCTGTTC ATCCAGACGA ACAAGCGCTG CAACCTGCGC
TGCGAGCACT GCGACTTCTG GAAGCTCGAC GACGCCGACC GTGCGCGCTA CCTCGGCCCG
GCGCGCCGGC ACGAGGTGCT GGCGGAGTTC GCCGCGATGA ATCCCCAGGG CAGCGTGGTG
ATCTGCGGCG GCGAGAGCAT GCTCGACCTG GAGGACTACT TCCACATCTC GCGCACCTGC
CGCGAACTGG GCCTCGCCTG CCTGTCGGTC ATCAACGGCA CCCGCGTGCG CGACGAGGCC
ACGGCCGAGC GCATGATCCG CGAGGGCCCG CACGGCATCT CGGTGTCGCT CAACAGCCAT
CGGCCGGCCC TGCACGACCG CACGCGCGGC GTGAAGGGCG CCTTCGGCAA GGCGGTCGCC
GCGCTGCGCC TGCTGCTGGC GGCGCGCCCG CCGGGCGGCG ACACCCGGAT CAACGTGATG
GGCCTCGTCT TCGACGAGAA CTACCTCGAG CTGGAGGACT TCTACGCCTT CGTGCTGGAC
GATCTGGGCG CCGACAAGCT GAAGCTGAAC TTCCTGCAGC CCAGCTTCGG CCAGATGGGG
CTGGTCGATC CGTTCTTCGC CACCCACCGC AACGTGGACC CGGACCGGCT GGTCGAGGTG
ATCCGCCGCT GCGACCAGCG CTTCGGCCTG GGGCTGAACC CGCTCTGGCT GCACCAGGTG
CACATGTACT TCTCCACGCT GCGCGCCTGC CCGGACGCCG CGCGCGGCTG GGGCTCGCAC
ACGCGCACGA CGGAACACAT CTGCAACACC TACGAGCGCA ACATCATGGT GGACCACTAC
GGCGTGGCGC GCCTGTGCTT CTCGGGCAGC TTTCCGGGCA TGCGGCTGGA CAAGCCCGGC
GACTTGCGCC TGTTCTGGCG CGAGGCGGAG TTCGTCCGCA CGGCGATGCG CGGGTGCAAC
CAGTTCTGCG GCATCAGCCA CAGCGTGCGG CGGGAGACCA GCACCTGCGC CTCGCGCCGA
CCGGCCGCGC TCTTTCCCGC CGCGCGGCCC GCGGCCGGCG TGGCGCGCAC CATTCCCCTG
CACGTGGACC GCGGAGGCTG A
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| Protein sequence | MELPPPLFLF IQTNKRCNLR CEHCDFWKLD DADRARYLGP ARRHEVLAEF AAMNPQGSVV
ICGGESMLDL EDYFHISRTC RELGLACLSV INGTRVRDEA TAERMIREGP HGISVSLNSH
RPALHDRTRG VKGAFGKAVA ALRLLLAARP PGGDTRINVM GLVFDENYLE LEDFYAFVLD
DLGADKLKLN FLQPSFGQMG LVDPFFATHR NVDPDRLVEV IRRCDQRFGL GLNPLWLHQV
HMYFSTLRAC PDAARGWGSH TRTTEHICNT YERNIMVDHY GVARLCFSGS FPGMRLDKPG
DLRLFWREAE FVRTAMRGCN QFCGISHSVR RETSTCASRR PAALFPAARP AAGVARTIPL
HVDRGG
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