| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0490 |
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| Symbol | |
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| ID | 7974286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 530166 |
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| End bp | 531350 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791093 |
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| Product | carboxylate-amine ligase |
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| Protein accession | YP_002942419 |
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| Protein GI | 239813509 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2170] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02050] uncharacterized enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCCGACA GCGACGACTT CCGCTCCGCC GCACTGCCCG CGGACCCCGC GAGCCGCGTC
GTCAAGCTCG AGCCCTTCAA CCGCTCCGAA GCGCTGTCGC TCGGCGTGGA GCTCGAGCTG
CAGCTCGTCA ACACGCACGA CTACGACCTG GCGCCCTATG CCGAGGACAT GCTTCGGCTG
ATGTCGCAGA CCCCGCTGCC CGGCAGCGTG GTGCCCGAGA TGACCTCGAG CATGATCGAG
ATCTCCACCG ACATCTGCCA TTCGGCGCAG GACGTGATCA CGCAGCTCTC GCCGATCCGC
GAGGCGCTGA TCAAGAACGC CGACAAGCTC AACATCGCGG TGGTGGGCGG CGGCACGCAT
GCCTTCCAGC AGTGGCACGA GCGGCGCATC TACGACAAGC CGCGCTTTCG CGAGCTGTCC
GAGCTGTACG GCTACCTGAG CAAGCAGTTC ACCATCTTCG GCCAGCACGT GCACATCGGC
TGCCCCGATG CCGACTCGGC GCTCTTGATG CTGCACCGCA TGTCGCGCTA CATCCCGCAC
TTCATTGCGC TGTCGGCCTC GTCGCCGTTC GTGCAGGGGC AGGACACGCA GTTCGACTCG
GCCCGGCTCA ACTCGGTGTT CGCGTTCCCG CTCTCGGGCC GCGCGCCGTT CACGCTGAGC
TGGAAGGAGT TCGAAGCGTA CTTCGAGCGC ATGACCCGCA CCGGCGTCGT GCGCAGCATG
AAAGACTTCT ACTGGGACAT CCGGCCCAAG CCCGAGTTCG GCACCATCGA GATCCGCGTG
TTCGACACGC CGCTCACCGT CGAGCGCGCG GCCGCGCTCG CGGGCTACGT GCAGTCGCTG
GCCGCATGGT TCCTGCAGGA GCAGCCCTTC GAGCCGACCG AGGACGACTA CCTCGTCTAC
ACCTACAACC GCTTCCAGGC CTGCCGCTTC GGGCTCGATG CGGTGTATGT GGACCCGGCC
AGCGGCCAGC ACATGCCGCT GCGCGACCAC ATCCTCATGA CCATGACGCA GCTCGAATGG
CACAGCGAGG CGCTCAACGC CACGCAGGCG CTCGGCGAGC TGCGCACCAG CGTGGAAGCC
AACCGCAACG ACGCGCGCTG GCTGCGCGAG AAGCAGGGCA AGGAGCGCCT CCTGGCCGAG
GTGGTGCGGC AGGCGGCGCT GCGCTTTCGC GGCGGCGGAG CCTAG
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| Protein sequence | MPDSDDFRSA ALPADPASRV VKLEPFNRSE ALSLGVELEL QLVNTHDYDL APYAEDMLRL
MSQTPLPGSV VPEMTSSMIE ISTDICHSAQ DVITQLSPIR EALIKNADKL NIAVVGGGTH
AFQQWHERRI YDKPRFRELS ELYGYLSKQF TIFGQHVHIG CPDADSALLM LHRMSRYIPH
FIALSASSPF VQGQDTQFDS ARLNSVFAFP LSGRAPFTLS WKEFEAYFER MTRTGVVRSM
KDFYWDIRPK PEFGTIEIRV FDTPLTVERA AALAGYVQSL AAWFLQEQPF EPTEDDYLVY
TYNRFQACRF GLDAVYVDPA SGQHMPLRDH ILMTMTQLEW HSEALNATQA LGELRTSVEA
NRNDARWLRE KQGKERLLAE VVRQAALRFR GGGA
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