| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0468 |
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| Symbol | |
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| ID | 7970209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 511506 |
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| End bp | 512153 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791071 |
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| Product | Lysine exporter protein (LYSE/YGGA) |
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| Protein accession | YP_002942397 |
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| Protein GI | 239813487 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.521562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGCA TCACGGTTCC GTTGCTGGGC ATCGCGGGCG CAATGATCGT CGGGGCCATG
AGCCCCGGAC CGAGCTTCGT CATGGTGGCG CGCACCGCCG TGTCGTCGTC GCGCCGCGAC
GGCCTGGCCG CGGCGCTGGG CATGGGCGCG GGCGGCGTGG TGTTCGCGAT CGCAGCCCTG
GTCGGGCTGC AGGCAGCCTT CCTCGCGGTG CCGGCGCTCT ACCTGGCGGT GAAGCTGCTC
GGCGGCGCCT ATCTTGTGTA CCTGGGCATC CGCATCTGGC GCGGTGCGCG CGAGCCGCTG
TCCGCCGCGC AGGACGAACG CGCGGCCGCA GGCACGGGCA GCAATGCGCG GCGCGCATTT
CTCCTCGGTA TGGGCACGCA GGTCAGCAAC CCGAAGACGG CGGTGGTCTA CGCCAGCATC
TTCGCGGCCT TCCTGCCGCG CGAGGTGCCG CTGGCGCTGG CGCTGGCGGT GCCGGCGGTG
ATCTTCTGCA TCGAGACCGG CTGGTATGCG GTCGTCGCGC TGGCGCTCTC GTCGGCGGCG
CCGCGCTCGG CCTACCTGCG CTACAAGGCC TGGATCGACC GCGCGGCCGG CGGCGTGATG
GTGCTGCTGG GCCTCAAGCT GCTGTCGGGC GTGCGCAGCA GCAGCTGA
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| Protein sequence | MSGITVPLLG IAGAMIVGAM SPGPSFVMVA RTAVSSSRRD GLAAALGMGA GGVVFAIAAL
VGLQAAFLAV PALYLAVKLL GGAYLVYLGI RIWRGAREPL SAAQDERAAA GTGSNARRAF
LLGMGTQVSN PKTAVVYASI FAAFLPREVP LALALAVPAV IFCIETGWYA VVALALSSAA
PRSAYLRYKA WIDRAAGGVM VLLGLKLLSG VRSSS
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