| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0407 |
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| Symbol | |
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| ID | 7973551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 439767 |
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| End bp | 440327 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644791010 |
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| Product | SmpA/OmlA domain protein |
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| Protein accession | YP_002942336 |
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| Protein GI | 239813426 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2913] Small protein A (tmRNA-binding) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCCA TTCTCCAACG CCGTCCCTGG CTGCTGGCCG CGGCCGTCGC CGCGACCTTC
TGCCTCGGTG CCTGCAGCGG CTTCAGCGAT CGCACGCGTG GTGCGCTGAC GGCCATCACG
CCCTACAAGG TCGAAGTGGT CCAGGGCAAT TTCGTGTCGA AGGAACAGGT CGAGGCGCTC
AAGCCCGGCA TGTCGCGCCA GCAGGTGCGC GAAATCCTCG GCACCTCGCT TCTGACCGAC
GTCTTCCACA AGGACCGCTG GGACTACGTC TTCACGATCA GGCGCCAGGG CGTCGATCCC
CAGGAACGCC GCCTGACCGT CTTCTTCAAC GGCGAATTGC TCGACCGCTT CGAGGGCGAC
CCGATGCCCA GCGAGGAAGA ATTCGTCGCC ACGCTGGACA CCCGCAAGAA GAGCGGCAAG
GTGCCGCCGC TCGAGGCGTC GGAAGAAGAG CTCAAGAAAT TCGCCCCCAA GGACGACGGC
AAGAAGGCCG ATGCCACCGC CACGGCCACC AGCCTGCCCC CGCTTCCCGC CGCATACCCC
CCGCTCGAAG CCGCGCGCTG A
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| Protein sequence | MPAILQRRPW LLAAAVAATF CLGACSGFSD RTRGALTAIT PYKVEVVQGN FVSKEQVEAL
KPGMSRQQVR EILGTSLLTD VFHKDRWDYV FTIRRQGVDP QERRLTVFFN GELLDRFEGD
PMPSEEEFVA TLDTRKKSGK VPPLEASEEE LKKFAPKDDG KKADATATAT SLPPLPAAYP
PLEAAR
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