Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0392 |
Symbol | |
ID | 7973536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 423526 |
End bp | 423855 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644790995 |
Product | NAD(P) transhydrogenase, subunit alpha part 2 |
Protein accession | YP_002942321 |
Protein GI | 239813411 |
COG category | [C] Energy production and conversion |
COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCCCG TTTCCCATAC CGTCATCAAC CTCATCATCT TCGTGCTGGC CATCTACGTG GGCTACCACG TGGTGTGGAC CGTCACGCCC GCGCTGCACA CGCCGCTGAT GGCCGTGACC AACGCGATCT CGGCCATCGT GGTGGTGGGC GCCATGCTGG CGGCCGCGCT CACCGAAACC CCGCTGGGCA AGACCATGGG CGTGCTCGCG GTGGCGCTGG CGGCGGTGAA CATCTTCGGC GGCTTCCTGG TCACGCGGCG CATGCTCGAG ATGTTCAAGA AGAAAGAGAA GAAGGCCGCA CCCAAGGCCG AAGCGGGAGC CTCGCAATGA
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Protein sequence | MDPVSHTVIN LIIFVLAIYV GYHVVWTVTP ALHTPLMAVT NAISAIVVVG AMLAAALTET PLGKTMGVLA VALAAVNIFG GFLVTRRMLE MFKKKEKKAA PKAEAGASQ
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