Gene Vapar_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0392 
Symbol 
ID7973536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp423526 
End bp423855 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content65% 
IMG OID644790995 
ProductNAD(P) transhydrogenase, subunit alpha part 2 
Protein accessionYP_002942321 
Protein GI239813411 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCCCG TTTCCCATAC CGTCATCAAC CTCATCATCT TCGTGCTGGC CATCTACGTG 
GGCTACCACG TGGTGTGGAC CGTCACGCCC GCGCTGCACA CGCCGCTGAT GGCCGTGACC
AACGCGATCT CGGCCATCGT GGTGGTGGGC GCCATGCTGG CGGCCGCGCT CACCGAAACC
CCGCTGGGCA AGACCATGGG CGTGCTCGCG GTGGCGCTGG CGGCGGTGAA CATCTTCGGC
GGCTTCCTGG TCACGCGGCG CATGCTCGAG ATGTTCAAGA AGAAAGAGAA GAAGGCCGCA
CCCAAGGCCG AAGCGGGAGC CTCGCAATGA
 
Protein sequence
MDPVSHTVIN LIIFVLAIYV GYHVVWTVTP ALHTPLMAVT NAISAIVVVG AMLAAALTET 
PLGKTMGVLA VALAAVNIFG GFLVTRRMLE MFKKKEKKAA PKAEAGASQ