Gene Vapar_0381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0381 
Symbol 
ID7973525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp415087 
End bp415527 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content69% 
IMG OID644790984 
Productglutathione-dependent formaldehyde-activating GFA 
Protein accessionYP_002942310 
Protein GI239813400 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.543361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGTC CGGTGAGCAG CCCCGAGAAC GCGGCCAACC GCACGCTGGC CGGCCGCTGC 
CTTTGCGGCG CGGTGCGCTA CACGGTGGCC GACGCCTTCG CCTATGCGCT GAACTGCCAC
TGCGCCGACT GCCGGCGCGC GACCGGCTCG GCCTTCAAGC CCTTCGCCGG CATCGAGCGG
CACAAGCTGG CCATTGCACA GGGCCAGGAC GAACTCCTGG TCTTCGGCAA AGAAGACGCG
GGCGACGTGC ACTGCCGCCA TTGCGGCTCG CTGCTCTACT CGGTGGTGCG CGACGGCCTG
TTCGTGCATG TGACGCTGGG CACGCTGGCC GACGACCCTT CGATCCGCCC GCGTGCGCAC
ATCTTCGTGG GCTCGAAGGC GCCCTGGTTC ACGATCACCG ACGACCTGCC CCAATACGCG
GGCCACGCCG ACGCCGATTG A
 
Protein sequence
MDSPVSSPEN AANRTLAGRC LCGAVRYTVA DAFAYALNCH CADCRRATGS AFKPFAGIER 
HKLAIAQGQD ELLVFGKEDA GDVHCRHCGS LLYSVVRDGL FVHVTLGTLA DDPSIRPRAH
IFVGSKAPWF TITDDLPQYA GHADAD