| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0348 |
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| Symbol | |
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| ID | 7973492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 375219 |
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| End bp | 376061 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644790951 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942277 |
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| Protein GI | 239813367 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCATC CAGATTTCAA GCCGCTCTCG CTGATGTCCG CCAGCCCGGT TGCCGCGGCG
GCTGCTGCGC AATCCTGGAC ACCGCTGCCC TATGCCGACC TGCCGCGCTA CGACGCGCAC
AGCCTGCTGC CGCACTGGCC GCGGCTGCAC GCGGGCCACG CGCTGCCGCC GCCGCCAAGC
GGGCATCCGC TGGCCGATGG CTGGGCGCTC TATCACAACG GCGAGTTCGA GCGCGCCGCA
GCGCTCGGCC TGGCGCACGG GCCGGAGGGC CTGGTGCTGG CCAACCAGGC CACCGCCGTC
TATGCCAACT ACCTGGAGCC GCGCGAATCG GTGCGGCTTT CGATGTTCCG CCAGGTCATC
GAACGCGCCG CCGCGCAAGT CGGCGCCGAG CCCGACAACT GCCACGCGCT CTACTGGCAG
GCCTATGCGC TCGGGCGCTA CAGCCAGGGC ATCAGCGTGG CGCGCGCGCT GGCGCAGGGC
CTCGGCAGCA AGCTCAAGGG GGCGCTCGAG CGCGTGATCG AACTGCAGCC GCAGCATGCC
GACGCGCACA TCGCGCTGGC CGCCTTCCAC GCCGAGGTGA TCGACAAGGT GGGCGCGCTG
GTCGGCCGCA TGACCTACGG CGTGCGCGCC GAAATGTCGG TCGAGCTGTT CGAGCGCGGC
CTCGAGCTGC ACCCCCATTC GCCCAGCGCG CTCATGGAAT ACGGCCGCGC GCTGCTCATG
CTGCACGGCG ACGCGCGCCT GGGCGAGGCC ACGCAGCTCT ACGAGAAGGC CGCCGCGCTG
CAGCCGGCGG ATGCCAAGGA ACGGCTCGAC GTGGAACTGG CGCGCGCCGG CCTGACGGAC
TGA
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| Protein sequence | MSHPDFKPLS LMSASPVAAA AAAQSWTPLP YADLPRYDAH SLLPHWPRLH AGHALPPPPS
GHPLADGWAL YHNGEFERAA ALGLAHGPEG LVLANQATAV YANYLEPRES VRLSMFRQVI
ERAAAQVGAE PDNCHALYWQ AYALGRYSQG ISVARALAQG LGSKLKGALE RVIELQPQHA
DAHIALAAFH AEVIDKVGAL VGRMTYGVRA EMSVELFERG LELHPHSPSA LMEYGRALLM
LHGDARLGEA TQLYEKAAAL QPADAKERLD VELARAGLTD
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