| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0335 |
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| Symbol | |
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| ID | 7973479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 359989 |
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| End bp | 361113 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644790938 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_002942264 |
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| Protein GI | 239813354 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAATC GCAGACATTT TTCCCTGGGC GCCGGCGCGG CCGCGCTCGG CGGCTTCCAG
TTGGCGCGGG CGCAGGGCGA CGTGCCGCTG GTGCTGGGCC AATCGGCACC GTTCACCGGC
CCGGCCGCGC AATTGGGCAT CCAGTTCCAC CAGGGCGCCA AGCTGTTCCT GGACCAGTAC
AACGCCCAGG CCGGCCGGCG CAACGTGGTC ATCAAGAACC TGGACGACGG CTACGAGCCC
GACCGCTGCG CCGCCAACAC GCAAAAGCTG ATCGAAGAAG ACGTGTTCGC GCTCTTCGGC
TACATCGGCA CGCCCACCAG CATGGCGGCG CTGCCGCTCG CGGTGAAGGA GAAGGTGCCT
TTCATCGCGC CCTTCACCGG CGCGATGTCG CTGCGCGAAC CCTTCCACAG GAACGTGTTC
CACCTGCGCG CCTCGTACAA CGACGAGACC GCGCTGATCG TGAAGCAGCT CACGCACCTG
GGCCTGAAGA AGATCGCGGT CTTCTACCAG AACGACGCCT ACGGCAAGGC GGGCCTGGAC
GGCGTCACGC TCGCGCTGTC GCAGCAGGAG CTCAAGCCGG TGGCGCTGGC CACGGTGGAG
CGCAATTCGG TCGACGTGGC CGCGGCGGTG AAGAGCATCA CGGCGGCGCG GCCCGACGCG
GTGGTCCAGG TGGGCGCCTA CAAGGCCTGC GCGGCCTTCA TCCGCCAGGC GCGCAAGGCG
GGCTACGGCG GCACCTTCTT CAACGTGTCC TTCGTGGGCA CCCAGGCGCT GGCCGACGAA
CTCGGCAAGG AGGGCGCGGG CGTGATGGTG ACGCAGGTGG TGCCTTCGCC CTACAACGCG
GCCAATGCGA TCACGCGCGA ATTCAGCGAG GCGGTGAAGA AGGCCGGCGC CGGCGCGAGC
GCCAATTTCT CGAGCCTGGA AGGCTACCTT GCCGCCAAGG TGCTGACCGA GGGCCTGCGC
CGCGCGCCGG GCAAGGCCTC GCGCGACGGC CTCATCACTG GCCTCGAAAG CATCGACCGG
CAGCAGTTCG GCGGTTTCGA GGTGTCGTTC TCGGCCAAGA ACCACGTGGC ATCGAAGTTC
GTCGAGCTGT CGATGCTGAC GGGCGACGGG CGGGTCCGGA CCTAG
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| Protein sequence | MINRRHFSLG AGAAALGGFQ LARAQGDVPL VLGQSAPFTG PAAQLGIQFH QGAKLFLDQY
NAQAGRRNVV IKNLDDGYEP DRCAANTQKL IEEDVFALFG YIGTPTSMAA LPLAVKEKVP
FIAPFTGAMS LREPFHRNVF HLRASYNDET ALIVKQLTHL GLKKIAVFYQ NDAYGKAGLD
GVTLALSQQE LKPVALATVE RNSVDVAAAV KSITAARPDA VVQVGAYKAC AAFIRQARKA
GYGGTFFNVS FVGTQALADE LGKEGAGVMV TQVVPSPYNA ANAITREFSE AVKKAGAGAS
ANFSSLEGYL AAKVLTEGLR RAPGKASRDG LITGLESIDR QQFGGFEVSF SAKNHVASKF
VELSMLTGDG RVRT
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