| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0320 |
|---|
| Symbol | |
|---|
| ID | 7972669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 342665 |
|---|
| End bp | 342898 |
|---|
| Gene Length | 234 bp |
|---|
| Protein Length | 77 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644790923 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002942249 |
|---|
| Protein GI | 239813339 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3530] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCG AAGACCTGCA GCGCCTCGTC ACGCTCGAAA TGCCCTTTGG CAAGCACAAG
GGCACACTGA TTGCCGATTT GCCCGGAAAT TACCTGAATT GGTTCGCACG CGAGGGTTTT
CCCTCGGGCG AAATTGGCCG GCTGCTTCAT TTGATGCATG AAATAGACCA CAACGGCCTC
TCCGGCCTGC TGCAACCGTT GCGAAACCGC CCCTCAGGAC GTGATGTTTC GTAA
|
|---|
| Protein sequence | MKPEDLQRLV TLEMPFGKHK GTLIADLPGN YLNWFAREGF PSGEIGRLLH LMHEIDHNGL
SGLLQPLRNR PSGRDVS
|
|---|
| |