| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0266 |
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| Symbol | |
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| ID | 7972615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 287621 |
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| End bp | 288625 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644790869 |
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| Product | NMT1/THI5 like domain protein |
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| Protein accession | YP_002942195 |
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| Protein GI | 239813285 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.312265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCATTC CTGAGAAATC GTCCGCCGCC GCGTCGCGCC GCCAGCTGCT GCAGGCCGGC
GCCGCGGGGC TGGCCGTGCT GGCTGCGCCC GCCATCGTGC GTGCGCAGGC CGCGCCCAAG
ATCCGCATCG GCTTCTGGCC CGTGGCCGCG GGCCTGCCCT TCTTTGCAGC GGTCGACCGC
GGCTATTTCA AGGAAGCGGG CCTCGACGTG GAGCCGCTCA AGTTCGCGGG CGCGCAGCAG
GTCATGGAAG GCATGCTCGC GGGCCGCTGC GACGGCAGCT CCAACGGCAC CGGCTCGGCC
AACCTCGCCA TCGGCGAGAT CGCGCAGCCG GGGCTGTTCA AGATCTTCTG CACCAACCCG
AGCAACGCCA GGTTCGTGCT CGACGAATTC ATCGTCGCCA AGGACAGCCC GACCAAGACC
ATGGCCGAGC TGGCCGGCAA GAAGATCGCG TCCGGCCCCG GCATCCAGAA CGTGACGCTG
TGCAAGACCA TGCTCGAGCG CGCCGGCGCC ACGGGCGCCA CGGTGAGCGA GCTGCCCATC
GGCCAGCATG TGGCGGCGCT CGTGGCGGGC CAGGTCGATG CCTGCTACAC GCTCGAGCCC
ACCGGCACCG TGGGCCGCAT GAACGGCACC ACGCGCGTCA TCGAGGCCGG CGTGGTCGCC
AAATACATCC TCGGCGATCC GATGGCGCCC TGGCACGGCG GCGCAGCCAG CCTCACCAGC
GAATTCATCA AGAAGAACCC CGACGCGGCA AGGAAGTACA TCGCCGCCTA TGCGCGCGGC
GTGGAGCTGG TGCGCAGCAA GCCCGACGAT GCGCGCCAGC ACATGAAGGG CTACACCGCC
ATCGAAGGCA GCCTCACGGC CGAAGTGCCG CTCGCCTCGT ACATGCTCTA CAACGAGTTC
AAGCCGAGCG ACGTCGCGTA CTTCCAGAAG TTCTACGACC TGTTCACCGA AAAAGGCATC
TTCGAGAAGA AGGTGCCGGT GGACGGCCTG CTCTACAAGG CTTGA
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| Protein sequence | MCIPEKSSAA ASRRQLLQAG AAGLAVLAAP AIVRAQAAPK IRIGFWPVAA GLPFFAAVDR
GYFKEAGLDV EPLKFAGAQQ VMEGMLAGRC DGSSNGTGSA NLAIGEIAQP GLFKIFCTNP
SNARFVLDEF IVAKDSPTKT MAELAGKKIA SGPGIQNVTL CKTMLERAGA TGATVSELPI
GQHVAALVAG QVDACYTLEP TGTVGRMNGT TRVIEAGVVA KYILGDPMAP WHGGAASLTS
EFIKKNPDAA RKYIAAYARG VELVRSKPDD ARQHMKGYTA IEGSLTAEVP LASYMLYNEF
KPSDVAYFQK FYDLFTEKGI FEKKVPVDGL LYKA
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