| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0245 |
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| Symbol | |
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| ID | 7971454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 261123 |
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| End bp | 261761 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790848 |
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| Product | fumarylacetoacetate (FAA) hydrolase |
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| Protein accession | YP_002942174 |
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| Protein GI | 239813264 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0326445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCCCT CCTCCCCTTT CCTGCCCGCC GGCACCGTGT ACGGCACGCT GCTGAACTTC
CGCGCGGAAA TGCAGGCGCT CGCGCCGCAG ATGACCGAGC CGCCCTACAA GGCACCGCCG
AAGGCGCCCG TGCTCTACGT GAAGACCGCC AACACCTGGA GCCCGCACGG CAGCGCCATC
GCGGTGCCTG CATCGGTGCC CGAGGTGGAG ATCGGCGCGA GCATCGGCAT GGTGATCGGC
GCCGAGGGCG ACGTGGAAGG CTTCGTGCTG ATGAACGATC TCTCGATTCC GCATGCGAGC
TTCTTCCGCC CGCCCGTGAA GTTCAAGTGC GTCGACGGTT TCCTGGGCGT CGGCCCGGCG
CTGCGCGATG CGCAGGAGGT GGCCGATCCC GCGGGCTTTC GCGCCGAGGT GCGCATCAAC
GGCACGCTGA AGCAGTCGAT CGACTTCTCG CAGCTCGTGC GGCCCGCGCA GCAGCTGCTG
GCCGACGTGG GCGAATTCAT GACGCTCGCG CATGGCGACG TGCTGATGCT CGGCTGCGAC
GCCGGCCGGC CGCTGGCGCG TGCGGGCGAC CGCATCGAGA TTTCCGCGCC GGGGTTCGAG
AGCCTCTGCA ACACGCTGGT GCAGGAGGCC GCCGCATGA
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| Protein sequence | MSPSSPFLPA GTVYGTLLNF RAEMQALAPQ MTEPPYKAPP KAPVLYVKTA NTWSPHGSAI
AVPASVPEVE IGASIGMVIG AEGDVEGFVL MNDLSIPHAS FFRPPVKFKC VDGFLGVGPA
LRDAQEVADP AGFRAEVRIN GTLKQSIDFS QLVRPAQQLL ADVGEFMTLA HGDVLMLGCD
AGRPLARAGD RIEISAPGFE SLCNTLVQEA AA
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