| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0236 |
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| Symbol | |
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| ID | 7971445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 252650 |
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| End bp | 253639 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790839 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942165 |
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| Protein GI | 239813255 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTCA CCCGCCGCCA GCTGCTGCAG ACCACCGGCG CCTCGGCGCT GCTTGCCAGC
CTGGGCCAGC GCGCCTTCGC GCAGGCCTCG CTCGAAACCG CCACCATCGT CACCGGCTTT
GCGGCCGGAG GCACCTCGGA CACCACCTGC CGGCGCCTCG CGCAGAAGCT CAGCCCCGAG
TACGCCAAGG CCGCCGTGGT CGAAAACCGC ACCGGCGCGG GCGGCCAGAT CGCCGTGAGC
TACGTGAAGG GCCGGCCCGC CGACGGCGCC ACCATCCTGC AGACGCCCAC CTCCATCCTC
ACGATCTACC CGCACATCTA CAAGAAGCTG CCGTACGACC CGATGGTGGA CCTCACGCCC
GTGAGCATCG CCTGCATCTT CGACTTCGGC TTTGCGGTCG GCCCCGCGGT GCCCGCCAGC
GTGAAGACGG TGCCCGAGTT CCTGGCCTGG GCCAAGGCCA ACCCGGCCGG CGCCAACTTC
GGCTCGCCGG CCGCGGGCTC CACGCCGCAC TTCATCGGCG CGCTCTTGGG CAAGAAGGGC
GGCGTCGAGC TCAAGCATGC CGCCTACCGC GGCACGCAGC CGGCCATGCT GGACCTGCTG
GGCAGCAACA TCTCGGCCGT CTCGGGGCCG ATCGGCGACA TCACGCAGCA CCTGGCCTCG
GGCAAGGTGC GCATCCTGGG CGTCTCGGGC GCCAAGCGCA GCCGCTTCGC GCCCGACGTG
CCGACCTTCG GCGAGCAGGG CATCAAGGAC ATGGCGCACA GCGAATGGTT CGCCTTCTTC
CTGCCGGCCA AGGCTTCGCC GGAACTGGTC GCGAAGCTGA ACACTGCAAT GAAGAACGCG
CTGGCGCAAA AGGACGTGAT CGACGGGCTC GGCACCTTCG GCCTGGAGGC GATGTCTTCC
ACGCCCGGCG AGCTGACCGA GCTGCTGAAG AAAGACACCG CCAAGTGGGC GCCGATCGTC
AAGGAAGTCG GCTTCACCGC GGAGGGGTAA
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| Protein sequence | MTFTRRQLLQ TTGASALLAS LGQRAFAQAS LETATIVTGF AAGGTSDTTC RRLAQKLSPE
YAKAAVVENR TGAGGQIAVS YVKGRPADGA TILQTPTSIL TIYPHIYKKL PYDPMVDLTP
VSIACIFDFG FAVGPAVPAS VKTVPEFLAW AKANPAGANF GSPAAGSTPH FIGALLGKKG
GVELKHAAYR GTQPAMLDLL GSNISAVSGP IGDITQHLAS GKVRILGVSG AKRSRFAPDV
PTFGEQGIKD MAHSEWFAFF LPAKASPELV AKLNTAMKNA LAQKDVIDGL GTFGLEAMSS
TPGELTELLK KDTAKWAPIV KEVGFTAEG
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