| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0221 |
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| Symbol | |
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| ID | 7971430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 237698 |
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| End bp | 238579 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644790824 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002942150 |
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| Protein GI | 239813240 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCTGC AGCACATCCC GCCCATCCAG TGCCTGCTGA CCTTCGAGGC CGTGGCGCGG
CTGCGGCATG CGGGCCGCGC GGCCGACGAG CTGTGCGTCA CCGCCAGTGC CGTGAGCCAC
CGCATCCGCC AACTCGAGGC GCACGTGGGC TTCAAGCTCT TCGGCCGCGG CGACTTCAGC
CTCACGGCCG ACGGCGCGGC CTACCTTGCC AACGTGCGCA CCGGCCTTGC TGCGCTGCAG
GCCACGCCGC TCGGCAACGC GGCGACGCGC GCCACGCGCC TGCGCATTGC CGTCACGCCC
ACCTTCAGCC GCGTGTTCCT GATGCCGCGG CTCGAGCTGT TCCGCAACAT CTACCCCGAC
ATCGAGCTGG TGCTGCAGGT GTCCATTCCG CTGCTCGACG TCACGGCCGA GCAGGCCGAT
CTCGAAGTGC GCTACGGCAG CGGCGCGTAC GCCGATTGCG AACACCGCCT GCTGCTCGAG
GAAGAGGTGG TGCCTGCCTG CAGCCCGAGC TACCTCAACG AATTCGGCCC CTTCGACGGC
TTTTGCACCG CGGCGGAGAT TGCCAGCGCG CGGCTCATCC GCAGTCCGCT CGAGCCCTGG
GGCACCTGGT TCGCAAGCTG CGGCCTCGAC CAGCCCGAGC CGCACGTCGG CTCGCAGTTC
AACGACCTGG GCCTGGTCTA CGACGCGGCT GCGAGCGGCT TCGGCGTGGC GCTGGTGCGC
CAGAAGATGG GCGCCGCCTG GTTCGAATCG GGCCGGCTGG TGCCACTGTC CGACCGGCCC
GTGCCCTCGC CGCACCGCCA CACCATCTGC TGGCAGCCCG GCACGCTCGA TCGCTGGGAA
TGCGCGGCGT TTGCGGACTG GCTCGCGCAG AGCCTGCGCT GA
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| Protein sequence | MALQHIPPIQ CLLTFEAVAR LRHAGRAADE LCVTASAVSH RIRQLEAHVG FKLFGRGDFS
LTADGAAYLA NVRTGLAALQ ATPLGNAATR ATRLRIAVTP TFSRVFLMPR LELFRNIYPD
IELVLQVSIP LLDVTAEQAD LEVRYGSGAY ADCEHRLLLE EEVVPACSPS YLNEFGPFDG
FCTAAEIASA RLIRSPLEPW GTWFASCGLD QPEPHVGSQF NDLGLVYDAA ASGFGVALVR
QKMGAAWFES GRLVPLSDRP VPSPHRHTIC WQPGTLDRWE CAAFADWLAQ SLR
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