| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0190 |
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| Symbol | |
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| ID | 7971399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 194236 |
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| End bp | 197997 |
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| Gene Length | 3762 bp |
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| Protein Length | 1253 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644790793 |
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| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
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| Protein accession | YP_002942119 |
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| Protein GI | 239813209 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGCC GCGCTGATCT GCCGCGCACG CGCGCGGACT TTCTCTCGGC CGACGGCGTG
CTGCTGGTCG TGCGCGAAAC GCCGCCCGCA CCGGCGCCCG CCAACGGCCA GCCCACGGCC
GTGGCGGGCA ATCCGATCGA AGGCGACGAG ATCCTGCTCG CCGTGTGGGA CGACGGCAGC
GCGTCTGCGC TCAACGGCCA CGTCGACCTC GGCACCGGCA TCCAGACCGC GCTCGCGCAG
ATCGTGGCCG AGGAGCTCGA GCTCGGCATG CCCTGCGTGC GCATGATGCT CGGCGACACC
GCACGCGCGC CCAACCAGGG CGCGACGATC GCGAGCGCCT CGATCCAGAT CCATGCACAG
CCGCTGCGCA TGGCCGCCGC GCAGGCGCGC GCCTGGCTGC TCGCGCGCGC GGCCGAGCGG
CTCGGCGTGG CCGCCGAGGC GCTGCAGGTG CGCAACGGCG TGGTGCGCGT GGCCGAGGCG
CCGGACCGCC GCATCAACTA CGCGGACCTG GTCGCGGGAC AGCGCACCGT GCTGCGGCTC
GACCCCGCCG CGGTGCCCAA GGATCCGGCC GACTACCGCA TCGTCGGCAC GCGCCAAGCC
CGCGTCGACA TTCCCGCCAA GCTCGCGGGC GACCTCGTGT TCGTGCACGA CATGCGCGTG
CCCGGCATGC TGCATGGCCG CGTGGTGCGC CCGCCATATG CGGGCGCGGA CCACGGCGAG
TTCATCGGCA ACACGCTCGA GTCGGTGGAC GAGTCGTCCA TTGCGCACAT TCCCGGCATT
CGCGCGGTGG TCGTGATCCG CGACTTCGTC GGCATCGCGG CCGAGCGCGA GGAGCACGCC
GAACAGGCGC TGCGCGAATT GCGCGTCAGG TGGAAACCCT GGCCCGGCAT GCCTGATCTT
TCCAACCTCG CGCAGGCCCT GCGCGACAAC CCGTCGACGC AGCGCCTGCT GGTCGACGAG
GGCGATGTCG ACGGCGCGAT CGCCGCGGCC GCGCAGCCGA TGCACCGCAC CTATGTGTGG
CCCTACCAGA TGCATGCGTC CATCGGACCC TCGTGCGCGC TGGCCGAGTG GCTGCCGGAG
GACGGCAGCG GCATGCAGTT GCGTTGCTGG GCCGGCTCGC AGAACCCGCA CGTGCTGCGT
GCCGATCTCG CGAAGCTCAT GGGCCTGGAC GACGTGCAGG TCGACGTCAT CCGCATGGAA
GCCGCGGGCT GCTACGGCCG CAACGGCGCC GACGACGCGG CGGCCGATGC GGCGCTGCTC
GCGCGCGCCG TGGGCGCACC GGTGCGCGTG CAGCTCACGC GCGAGCAGGA GCATGCCTGG
GAGCCCAAGG GCGCCGCGCA GCTCATGGAA GTGGATGGCG GCCTGATGGC CGACGGCCGC
ATCGCCGCCT ACGACTTCGA AACCTCCTAT CCATCGAACG GCGCGCCCAC GCTCGCGCTG
CTGCTCACGC GCACCATCGA GCCGGTGGCG CAGGCCTTCG AAATGGGCGA CCGCACGGCG
CGTCCGCCCT ACAGCGTCGA CAACCTGCGC GTGAAGGTCA ACGACATGGC GCCGATCGTG
CGCGCCTCGT GGCTGCGCGG CGTGTCGGCG CTGCCAAGCT CCTTCGCGCA CGAGTCGTAC
ATCGACGAGC TGGCCACCGC GGCCGGCGTC GATCCGGTGC AGTTCCGGCT GCGCCACCTG
GACGATACGC GCGCGGTCGA GCTGGTGCAG GCCACCGCGC AGAAGGCCGG CTGGCGCATG
CGCACCGGCC CAGAGGAGAA CGCCGACGGC GGGCTCGGTG AAGGTGGCGA CATCCTCTTC
GGCCAGGGCT TCGCCTATGC GCGCTACATC CACAGCAAGT GGCCCGGCTT CGGCGCCGCG
TGGGCTGCAT GGGTGGCCGA CGTCGAGGTC AACCGCAGGA CCGGCGAGGT GCACGTGCGC
CGCGTGGTGG TGGGGCACGA CGCGGGGCTG CTGGTCAACC CCGCGGGCGT CGAGCACCAG
GTGCACGGCA ATGTGATCCA GACCACGAGC CGCGCGCTCA AGGAAGAGGT GCAGTTCGCG
CCGCAGCAGG GCGCAGAAGC AGCGGCGGCC GGTGCGCAGC TGCTGACCGG CGTGCGGCCC
TCGGGCGTGG TCGCGAGCCG CGAGTGGGGC AGCTACCCGA TCATCAATTT CCGCGACGTA
CCGGTGATCG AGGTCATGCA CATGCCGCGA CCCGGCGAAC CCTCGCTCGG CGCGGGCGAG
TCGTCGTCGG TGCCGGGGAC GGCGGCGATC GCGAATGCGA TCTTCGATGC GACGGGCGTG
CGCTTCCGCG AGCCGCCGTT CACGCCGGAG AAGGTGCTGG CGGCGTTGAA TCGGGGTTTG
CTCCCTCCCC TTCCGGGGGA GGGCGGGGGT GGGGGCGAGC GGCGCTCGAA GGGTGACGCT
GCCGTGCCCC CATCCCAACC TTCCCCCGGG AGGGGAAGGA GCAATGCACC GTGGCCTCGG
CGCAAGAGCG TGTGGGCCAC CGGCACCGCA CTCTTCATCG GCGGCCTCGG CCTCATCGCC
GGCCTGCTCG GCTGGCGCTC CGCCATTGCT CCGGTCTCGC TCAGCGCCCC GGTCTACAGC
GAGGCCACCA TCGAACGCGG CCGCGTGCTC GCCGCGCTCG GCGACTGCGC CGTGTGCCAC
ACCGCACCGG GCGGCGCGCC CAATGCGGGT GGCCGCGCGA TGCAGACACC CTTCGGCACG
CTCTACACCA CCAACCTCAC GCCCGATGCC GACACGGGCC TGGGCCGCTG GTCGTTCAGC
GCCTTCCAGC GCGCGATGCG CGAAGGCGTC TCGCGCGACG GCCACCATCT GTACCCGGCC
TTCCCGTACA CCGCCTTCGC GAAAACCAGC GACGACGACC TGCAGGCGCT CTACGCCTAC
TTCATGTCGA TGCCCGCGGT GCGCGCCGAG ACGCCGAAGG CCGAGCTCAA GTTTCCGTTC
AGCATGCGGC CGCTCATGGC CGGATGGAAC GCGCTCTTCC ACGACCCCGC ACCGCTGCAG
CCGGTGGCCA CGCAAAGCGC CGAGTGGAAC CGCGGCGCCT ACCTCGTGAA CGGCCTGGGG
CATTGCGGCG CCTGCCACAC GCCGCGCAAC GTGCTCGGTG CGGAGCAGGG CGGCAGCGCG
TTTCTCTCGG GTGCGATGGT CGATGGCTGG GAGGCGCCGG CGCTCACGCA GCTGTCGAAG
TCCGCCGTGC CGTGGGACGC CGACGCGCTC TACCGCTATC TGCGCAATGG CCACTCGCCG
CGCCATGGCA TCGCGGGTGG GCCGATGGCC GAGGTGGTGC GCGAACTCGC GCAGGTGCCC
GATGCCGACG TGCGCGCGAT GGCCACCTAC CTCGCCTCGT TCAATCCGGC GCCCGCGGCC
GATCCGCAGG CCGTGGCGCA ACAGGTGGTC GACAACGCGG CGCGCACGCA GGGCCGGCTG
CTCGGTCCCG CGCAGCGCAT GTTCGACAGC GCCTGCGCGT CGTGCCATCA CGACGGCGAC
GGCCCCACGC TGCTCGGCGT GAACACCCCG CTCGCGCTCA ACGGCAATCT CACGAGCGCG
CGGCCCGACA ACCTGCTGCG CACCATCCTC GATGGCGTGC GCGAGCCCGC GAGCCAGGGC
ATCGGCTTCA TGCCGGCCTT CCGCGACGCG CTCGACGACC GTCAGATCGC CGAACTCGCG
GGCTACATGC GCGCGCGCTT CGCACCGCAG GAGCCGGCGT GGAAGAACCT GCCGGCCGAA
GTCGCCCGCG TGCGCGCCGC GCGCGGCCAC GGCGCCGAAT AA
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| Protein sequence | MTRRADLPRT RADFLSADGV LLVVRETPPA PAPANGQPTA VAGNPIEGDE ILLAVWDDGS
ASALNGHVDL GTGIQTALAQ IVAEELELGM PCVRMMLGDT ARAPNQGATI ASASIQIHAQ
PLRMAAAQAR AWLLARAAER LGVAAEALQV RNGVVRVAEA PDRRINYADL VAGQRTVLRL
DPAAVPKDPA DYRIVGTRQA RVDIPAKLAG DLVFVHDMRV PGMLHGRVVR PPYAGADHGE
FIGNTLESVD ESSIAHIPGI RAVVVIRDFV GIAAEREEHA EQALRELRVR WKPWPGMPDL
SNLAQALRDN PSTQRLLVDE GDVDGAIAAA AQPMHRTYVW PYQMHASIGP SCALAEWLPE
DGSGMQLRCW AGSQNPHVLR ADLAKLMGLD DVQVDVIRME AAGCYGRNGA DDAAADAALL
ARAVGAPVRV QLTREQEHAW EPKGAAQLME VDGGLMADGR IAAYDFETSY PSNGAPTLAL
LLTRTIEPVA QAFEMGDRTA RPPYSVDNLR VKVNDMAPIV RASWLRGVSA LPSSFAHESY
IDELATAAGV DPVQFRLRHL DDTRAVELVQ ATAQKAGWRM RTGPEENADG GLGEGGDILF
GQGFAYARYI HSKWPGFGAA WAAWVADVEV NRRTGEVHVR RVVVGHDAGL LVNPAGVEHQ
VHGNVIQTTS RALKEEVQFA PQQGAEAAAA GAQLLTGVRP SGVVASREWG SYPIINFRDV
PVIEVMHMPR PGEPSLGAGE SSSVPGTAAI ANAIFDATGV RFREPPFTPE KVLAALNRGL
LPPLPGEGGG GGERRSKGDA AVPPSQPSPG RGRSNAPWPR RKSVWATGTA LFIGGLGLIA
GLLGWRSAIA PVSLSAPVYS EATIERGRVL AALGDCAVCH TAPGGAPNAG GRAMQTPFGT
LYTTNLTPDA DTGLGRWSFS AFQRAMREGV SRDGHHLYPA FPYTAFAKTS DDDLQALYAY
FMSMPAVRAE TPKAELKFPF SMRPLMAGWN ALFHDPAPLQ PVATQSAEWN RGAYLVNGLG
HCGACHTPRN VLGAEQGGSA FLSGAMVDGW EAPALTQLSK SAVPWDADAL YRYLRNGHSP
RHGIAGGPMA EVVRELAQVP DADVRAMATY LASFNPAPAA DPQAVAQQVV DNAARTQGRL
LGPAQRMFDS ACASCHHDGD GPTLLGVNTP LALNGNLTSA RPDNLLRTIL DGVREPASQG
IGFMPAFRDA LDDRQIAELA GYMRARFAPQ EPAWKNLPAE VARVRAARGH GAE
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