| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0178 |
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| Symbol | |
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| ID | 7971387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 182133 |
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| End bp | 183749 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790781 |
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| Product | 6-hydroxynicotinate reductase |
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| Protein accession | YP_002942107 |
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| Protein GI | 239813197 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAAC ACACCAAGAC AGACGGACTG CCCGGCATGG ACATGCCGGT GGCCTTCGAA
GCCGGTAGCG GCGCCTTTGG CAAGGCACCG CCGCGCAACG AGAAGATGAG CAGCGCCAAG
GTCGAATGCA ACGCCTGCCC GGTGCTGTGC CAGATCTCCG ACGGCCGCAC CGGCGCCTGC
GACCGCTATG CGAACAAGGA GGGCGTGCTG GTGCGCGTCG ACCCGGTGCT GCTGCTGCGC
CGCGAAATCG CGAGCGAGAC CCCGGTGCTG GTGCCCTTCG ACCGGCCGGC TGCAGAGAAG
TCCGAGGGCA GCGTGCCCGA CTGGGACGGC GACCTGCTGC ACGCCGATGA AGTCTTCGTG
ACCGGCGTGG GCTCGTCCAC CACCTATCCC GACTACAAGC CGGCCCCTTT CATCGTGGCC
TCCAAGGCCC AGGGCGTCGA CATGGTCACC GTCGTCACCG AGGGCATCTT CAGCTACTGC
AGCTTCAAGG TGAAGATCGA CACCGACCGC TTCCTCGGCT CCGAGCAGGC CAATGTGCGC
TACCGCGGCG AGGTGGTCGG CCATGTCACC ACGGCCGAAT ACGGCTCGCA GATGCTGTCC
CTTGGCGGCG TGCACCACCT CACCGGCGGC AGCAAGAAGG AAGGCCGCAT GACGGCCGAG
CTGATGCAGC TGCTGGGCAA CAAGAAGGCC GTCGAGTGCA CCATCGACGG CGGCTCCACG
CTCGTCATCC AGGCCGGAAA AGCACCCATC GTCAATGGCG TGGAAGAGCA GCGCATGCGC
GTGGGCTGCG GCTCGGCGGC CGTGGGCATC TTCGCGCGCC AGTTCGCGGG CGTGGCCGAC
GAGGTGGTGG TGGTGGACGA CCACATCACC GGCGTGCTCA CGGAGCACCA GGCCGGGCGC
TGCCTCGACA TGGCGCCTTC GGGCATCCAG ATGCTGGGGC GCAAGTCCAC GCCCGGGCGC
TACTTCCAGG TGGCGAACCC GGGCAACGGC TGGGGCGGCA CCGACATCGC CGATCCGCTC
TCGATCATCG AGGGCTGGGA AGAAGGCGTG GCGCGGCCGG GCCTGCGCCT CCTGATGACC
TCGACCACCG GCGAGCATGC CCAGTGGTAC GTGCTCGACG AGGCGCTCAA GCCCGTCGAG
CAGCCCATGC CGCCCGAGGT GCGCCGCATC GTCGAGCGCA TCGGCGAGAA CTGCGAACCA
TCGCTGTGCA CCGTGCTGTT CCTCGGTGGT GCGGGCGGGT CCTTGCGCGC CGGCGTCACC
GAGAACCCGG TGCTGCTCAC GCGCGCCATC AAGCGTGCGC TCGTCAACGT GACCTGCGGC
GGCGCGCCGG CCTATGTGTG GCCCGGCGGC GGCATCACCG TGATGGCGGA CGTCATGCGC
ATGCCCGACA ACAGCTTTGG CACCGTGCCC ACGCCGGCCA TCGTGGCGCC CATCGAGTTC
AGCATGCGGC GCGACGACTA CCTGGCGCTC GGCGGCCACA TGGAACACAT CTTCCCGCTC
GAGCAGGCGC TCGCGCGCGG CGCCTGGCAG GAAGACGGCG CGCCGCTGGC GCGGCAATGG
GTCGTCATCG ACGAGGCCAA TCCGTGGCCG CTCGGCCACC CACCCATGCT GGGTTGA
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| Protein sequence | MTEHTKTDGL PGMDMPVAFE AGSGAFGKAP PRNEKMSSAK VECNACPVLC QISDGRTGAC
DRYANKEGVL VRVDPVLLLR REIASETPVL VPFDRPAAEK SEGSVPDWDG DLLHADEVFV
TGVGSSTTYP DYKPAPFIVA SKAQGVDMVT VVTEGIFSYC SFKVKIDTDR FLGSEQANVR
YRGEVVGHVT TAEYGSQMLS LGGVHHLTGG SKKEGRMTAE LMQLLGNKKA VECTIDGGST
LVIQAGKAPI VNGVEEQRMR VGCGSAAVGI FARQFAGVAD EVVVVDDHIT GVLTEHQAGR
CLDMAPSGIQ MLGRKSTPGR YFQVANPGNG WGGTDIADPL SIIEGWEEGV ARPGLRLLMT
STTGEHAQWY VLDEALKPVE QPMPPEVRRI VERIGENCEP SLCTVLFLGG AGGSLRAGVT
ENPVLLTRAI KRALVNVTCG GAPAYVWPGG GITVMADVMR MPDNSFGTVP TPAIVAPIEF
SMRRDDYLAL GGHMEHIFPL EQALARGAWQ EDGAPLARQW VVIDEANPWP LGHPPMLG
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