| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0169 |
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| Symbol | |
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| ID | 7971378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 171348 |
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| End bp | 172277 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644790772 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002942098 |
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| Protein GI | 239813188 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTCT CCAGCGACAA CGTCGAGGTC TTCTTGGCCG TGATCGACCA CGGCTCCTTC
TCGGCCGCGG CGCGCGCGCT GCGCAAGGTG CCCTCGGCCG TCAGCATGGC CATTGCCAAC
CTCGAGGCCG AACTGGCCCT GCCGCTGTTC GACCGCAGCG GCCGCGAGCC GCAGCCGACC
GCCGCCGCCC GCTCGCTGGA GCCGCAGGCG CGCCTCCTGG CGGCCCAGTT GAAGCAGCTG
CAGGTGCAGG CCCTGGCGCT CACGCAGGGC CTGGAAAACC GCCTCACGCT GGCCATTGCG
CCCGAACTGC TGGCGGCGCC CTGGAGCGGG CCGCTGGCCG CGCTGGCCGA GGAATATCCG
CTGCTGCAGG TCGAGGTGCT GGCCGCGCCG CAGGCCGATG CGCTGGCGCT GCTGCACAGC
GGCCGCGCAC AGCTGGCGCT GGTGTTCGAG CGCCCGAGCC TCGACGGGCG CGAGGGGTTC
CAGGAAGTCG GCAGCGACAC CATGGTGGCC GTGATGGCGC CCGGCCATCC CGTGCTGCTG
GCGGCCGCCG GCGAGCGGCT GCGCGAGGAG CACCTGACGA ACACCCGGCA GATCGTGGTG
GCGGGGCGCG ATCTCGCCAC CAGCGACCCG CGCTTCGTGT TCGCGCGCCA CGTCTGGCGC
ACCGACAACG CGCTGGCCGC GCTGAGCCTG ATCACGGCCG GCCTCGGCTG GGGCTGGCTG
CCGCGCAATT TCGCCAGGCC GCACGTGGCC GCCGGCGCGC TGGTCGAGAT TCCGTTCGAG
AACCTCAGCA ACGGGCTCGA CCTGTGGGTC GACGTGGTGT GGTCGCGCGA GCGGCCGCTG
GGCCTCGGCG CTCAGCGCTT CGTGGCGCTG ATCGCGCGCG ACCGGCAGGC CGCGGCGGGC
ATTTCCGCCG CCGACGATCC GCGGGGCTGA
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| Protein sequence | MAFSSDNVEV FLAVIDHGSF SAAARALRKV PSAVSMAIAN LEAELALPLF DRSGREPQPT
AAARSLEPQA RLLAAQLKQL QVQALALTQG LENRLTLAIA PELLAAPWSG PLAALAEEYP
LLQVEVLAAP QADALALLHS GRAQLALVFE RPSLDGREGF QEVGSDTMVA VMAPGHPVLL
AAAGERLREE HLTNTRQIVV AGRDLATSDP RFVFARHVWR TDNALAALSL ITAGLGWGWL
PRNFARPHVA AGALVEIPFE NLSNGLDLWV DVVWSRERPL GLGAQRFVAL IARDRQAAAG
ISAADDPRG
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