| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0147 |
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| Symbol | |
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| ID | 7971683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 145019 |
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| End bp | 146881 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644790750 |
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| Product | phosphoenolpyruvate carboxykinase |
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| Protein accession | YP_002942076 |
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| Protein GI | 239813166 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1274] Phosphoenolpyruvate carboxykinase (GTP) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.262073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAC CCACGATGCA GGGCCTCGCC ATCCAGGCAC CCTCATACGT CAAGAACGCA
AAACTGATTG CCTGGGTGGC CGACATGGCC GCGCTTTGCA AACCCGAGGC CATTCACTGG
TGCGACGGCA GCAAGGAAGA GTACGACCGC CTCTGCCAGC AGCTGGTCGA CGCGGGCACC
TTCAAGAAGC TCAATCCGGC CAAGCGCCCC AACTCCTTCC TCGCGGTGTC CGACCCGAGC
GACGTGGCGC GCGTCGAGGA CCGCACCTTC ATCTGCTCCG AAAAGAAGGA AAACGCCGGC
CCCACCAACA ACTGGATGGC CCCGGCCGAA ATGCGCGCCA CGCTGCAGCC GCTGTTCGAC
GGCTGCATGA AGGGCCGCAC GATGTACGTG GTGCCGTTCA GCATGGGCCC GCTGGGCTCG
CCGATTGCCC ACATCGGCAT CGAGCTTTCC GACAGCCCCT ACGTGGCGGT CAACATGCGC
ATCATGACCC GCATGGGCAA GGCCGTGTAC GAGGTGCTCG GCGCCGACGG CGAATTCGTG
CCCTGCGTGC ACACCGTGGG TGCGCCGCTG GAAGCGGGCC AGAAGGACGT GGCCTGGCCC
TGCAACAAGA CCAAGTACAT CGTCCACTAC CCCGAAACGC GCGAGATCTG GAGCTACGGC
TCGGGCTACG GCGGCAATGC GCTGCTGGGC AAGAAGTGCT TCGCGCTGCG CATCGCCTCC
AACATGGGCC GCGACGAAGG CTGGCTGGCC GAGCACATGC TCATCCTGGG CGTGACCAAT
CCCCAGGGCA AGAAATACCA CGTGGCCGCG GCCTTCCCGA GCGCCTGCGG CAAGACCAAC
TTCTCGATGC TGGTGCCGCC CGCCGGCTTC GAGGGCTGGA AGGTCACGAC CATCGGCGAC
GACATCGCCT GGATCAAGCC CGGCAAGGAC GGCCGCCTCT ACGCGATCAA CCCCGAGGCG
GGCTACTTCG GCGTGGCGCC CGGCACCAAC ATGCTGACCA ATCCGAACTG CATGGACAGC
CTGGACCATG ACGTGATCTT CACCAACGTC GCGCTCACCG ACGACGGCGA CGTTTGGTGG
GAAGGCATGG AGCAGGACAC CGGCTCGCTG CCCGCGCACC TGATCGACTG GCAGGGCAAG
GACTGGACGC CGCAGATCGC CAAGGAAACC GGCGCCAAGG CCGCGCATCC GAATTCGCGC
TTCACCGTGG CCGCCACCAA CAACCCGGCG CTCGACGACG CCTGGGACGA CCCGAAGGGC
GTGGCCATCG ACGCCTTCAT CTTCGGCGGC CGCCGCTCGA CCACCGTGCC GCTCGTGACC
GAGGCCCGCA ACTGGGTCGA AGGCGTCTAC ATGGCCGCCA CCATGGGCTC CGAAACCACC
GCCGCGGCCG CCGGCCAGCA GGGCGTGGTG CGCCGCGACC CGTTCGCGAT GCTGCCGTTC
ACGGGCTACA ACATGAGCGA CTACTTCCAG CACTGGCTCG ACCTGGGCAA GAAGCTCGAG
GCCTCGGGCG CCAAGCTGCC GAAGATCTAC ACCACCAACT GGTTCCGCAA GGGTGCCGAC
GGCAAGTTCG CCTGGCCCGG CTACGGCGAG AACATGCGCG TTCTCAAGTG GATGATCGAC
CGCGTCGAAG GCACCGCCAA GGGCACCGAG CACATCACCG GCGTGAGCCC GCGCTACGAA
GACCTCAACT GGAACGGCCT GGAATTCAGC GCCGAGCAGT TCGCCACCGT CACCAGCATG
GACAAGGCCG CCTGGCAGGC CGAGCTCAAG CTGCATGCCG AGCTGTTCCA GCAGCTGGCG
CACCACCTGC CCAAGGAACT GCCGGAAACC AAGGCGGCCA TCGAGCAGCG CCTGGCGGCC
TGA
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| Protein sequence | MNAPTMQGLA IQAPSYVKNA KLIAWVADMA ALCKPEAIHW CDGSKEEYDR LCQQLVDAGT
FKKLNPAKRP NSFLAVSDPS DVARVEDRTF ICSEKKENAG PTNNWMAPAE MRATLQPLFD
GCMKGRTMYV VPFSMGPLGS PIAHIGIELS DSPYVAVNMR IMTRMGKAVY EVLGADGEFV
PCVHTVGAPL EAGQKDVAWP CNKTKYIVHY PETREIWSYG SGYGGNALLG KKCFALRIAS
NMGRDEGWLA EHMLILGVTN PQGKKYHVAA AFPSACGKTN FSMLVPPAGF EGWKVTTIGD
DIAWIKPGKD GRLYAINPEA GYFGVAPGTN MLTNPNCMDS LDHDVIFTNV ALTDDGDVWW
EGMEQDTGSL PAHLIDWQGK DWTPQIAKET GAKAAHPNSR FTVAATNNPA LDDAWDDPKG
VAIDAFIFGG RRSTTVPLVT EARNWVEGVY MAATMGSETT AAAAGQQGVV RRDPFAMLPF
TGYNMSDYFQ HWLDLGKKLE ASGAKLPKIY TTNWFRKGAD GKFAWPGYGE NMRVLKWMID
RVEGTAKGTE HITGVSPRYE DLNWNGLEFS AEQFATVTSM DKAAWQAELK LHAELFQQLA
HHLPKELPET KAAIEQRLAA
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