| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0116 |
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| Symbol | |
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| ID | 7971652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 116995 |
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| End bp | 117399 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644790719 |
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| Product | membrane protein of unknown function |
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| Protein accession | YP_002942045 |
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| Protein GI | 239813135 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1950] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.486149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAACA ACCTCGCTCC CTTTCTCGTG CACTGGGCCA TCACCGCGCT GTCGCTGTGG
GTGGCCAGCC TGATCTTTCG CGGCATCAAG TTCGAGAGCA CTTCCGCGCT CGTGATCTCG
GCCCTGCTGC TGGGCCTGGC CAATGCCGTC GTCAAGCCGC TCCTGATCGT GCTCACGCTG
CCGCTGACGC TGTTGACGCT CGGCCTGTTC CTGCTGGTGA TCAACGCGCT GATGATCATG
CTGGTGGCCG CGCTGGTGCG CGGGTTCAAG CTCTCGGGCT TCTGGACCGC GTTCTTCGCG
AGCATCTTCA TCTCGCTGCT GAGCATTGCG ATCGATTCGC TGGTGAGCAG CGGCGACCCC
GCCACCACCA TCCAGATGCC GACGGGCAGC GGCAAGTGGC TGTAG
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| Protein sequence | MLNNLAPFLV HWAITALSLW VASLIFRGIK FESTSALVIS ALLLGLANAV VKPLLIVLTL
PLTLLTLGLF LLVINALMIM LVAALVRGFK LSGFWTAFFA SIFISLLSIA IDSLVSSGDP
ATTIQMPTGS GKWL
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